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FAM24B (family with sequence similarity 24 member B)

Identity

Alias_namesfamily with sequence similarity 24, member B
Alias_symbol (synonym)MGC45962
AC073585.2
Other alias-
HGNC (Hugo) FAM24B
LocusID (NCBI) 196792
Atlas_Id 63176
Location 10q26.13  [Link to chromosome band 10q26]
Location_base_pair Starts at 122849094 and ends at 122879641 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SHTN1 (10q25.3) / FAM24B (10q26.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM24B   23475
Cards
Entrez_Gene (NCBI)FAM24B  196792  family with sequence similarity 24 member B
Aliases
GeneCards (Weizmann)FAM24B
Ensembl hg19 (Hinxton)ENSG00000213185 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213185 [Gene_View]  chr10:122849094-122879641 [Contig_View]  FAM24B [Vega]
ICGC DataPortalENSG00000213185
TCGA cBioPortalFAM24B
AceView (NCBI)FAM24B
Genatlas (Paris)FAM24B
WikiGenes196792
SOURCE (Princeton)FAM24B
Genetics Home Reference (NIH)FAM24B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM24B  -     chr10:122849094-122879641 -  10q26.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM24B  -     10q26.13   [Description]    (hg19-Feb_2009)
EnsemblFAM24B - 10q26.13 [CytoView hg19]  FAM24B - 10q26.13 [CytoView hg38]
Mapping of homologs : NCBIFAM24B [Mapview hg19]  FAM24B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL832386 AL832795 AV762334 BC031343 BG490871
RefSeq transcript (Entrez)NM_001204364 NM_152644
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM24B
Cluster EST : UnigeneHs.114648 [ NCBI ]
CGAP (NCI)Hs.114648
Alternative Splicing GalleryENSG00000213185
Gene ExpressionFAM24B [ NCBI-GEO ]   FAM24B [ EBI - ARRAY_EXPRESS ]   FAM24B [ SEEK ]   FAM24B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM24B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)196792
GTEX Portal (Tissue expression)FAM24B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N5W8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N5W8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N5W8
Splice isoforms : SwissVarQ8N5W8
PhosPhoSitePlusQ8N5W8
Domains : Interpro (EBI)FAM24   
Domain families : Pfam (Sanger)FAM24 (PF15193)   
Domain families : Pfam (NCBI)pfam15193   
Conserved Domain (NCBI)FAM24B
DMDM Disease mutations196792
Blocks (Seattle)FAM24B
SuperfamilyQ8N5W8
Human Protein AtlasENSG00000213185
Peptide AtlasQ8N5W8
HPRD13299
IPIIPI00166944   
Protein Interaction databases
DIP (DOE-UCLA)Q8N5W8
IntAct (EBI)Q8N5W8
FunCoupENSG00000213185
BioGRIDFAM24B
STRING (EMBL)FAM24B
ZODIACFAM24B
Ontologies - Pathways
QuickGOQ8N5W8
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkFAM24B
Atlas of Cancer Signalling NetworkFAM24B
Wikipedia pathwaysFAM24B
Orthology - Evolution
OrthoDB196792
GeneTree (enSembl)ENSG00000213185
Phylogenetic Trees/Animal Genes : TreeFamFAM24B
HOVERGENQ8N5W8
HOGENOMQ8N5W8
Homologs : HomoloGeneFAM24B
Homology/Alignments : Family Browser (UCSC)FAM24B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM24B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM24B
dbVarFAM24B
ClinVarFAM24B
1000_GenomesFAM24B 
Exome Variant ServerFAM24B
ExAC (Exome Aggregation Consortium)FAM24B (select the gene name)
Genetic variants : HAPMAP196792
Genomic Variants (DGV)FAM24B [DGVbeta]
DECIPHERFAM24B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM24B 
Mutations
ICGC Data PortalFAM24B 
TCGA Data PortalFAM24B 
Broad Tumor PortalFAM24B
OASIS PortalFAM24B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM24B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM24B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM24B
DgiDB (Drug Gene Interaction Database)FAM24B
DoCM (Curated mutations)FAM24B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM24B (select a term)
intoGenFAM24B
Cancer3DFAM24B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM24B
Genetic Testing Registry FAM24B
NextProtQ8N5W8 [Medical]
TSGene196792
GENETestsFAM24B
Target ValidationFAM24B
Huge Navigator FAM24B [HugePedia]
snp3D : Map Gene to Disease196792
BioCentury BCIQFAM24B
ClinGenFAM24B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD196792
Chemical/Pharm GKB GenePA134880209
Clinical trialFAM24B
Miscellaneous
canSAR (ICR)FAM24B (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM24B
EVEXFAM24B
GoPubMedFAM24B
iHOPFAM24B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:08:01 CEST 2017

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