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FAM25C (family with sequence similarity 25, member C)

Identity

Alias_namesfamily with sequence similarity 25, member C
Alias_symbol (synonym)bA164N7.4
Other alias
HGNC (Hugo) FAM25C
LocusID (NCBI) 644054
Atlas_Id 63180
Location 10q11.22  [Link to chromosome band 10q11]
Location_base_pair Starts at 48247662 and ends at 48252143 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM25C   23586
Cards
Entrez_Gene (NCBI)FAM25C  644054  family with sequence similarity 25, member C
AliasesbA164N7.4
GeneCards (Weizmann)FAM25C
Ensembl hg19 (Hinxton)ENSG00000276430 [Gene_View]  chr10:48247662-48252143 [Contig_View]  FAM25C [Vega]
Ensembl hg38 (Hinxton)ENSG00000276430 [Gene_View]  chr10:48247662-48252143 [Contig_View]  FAM25C [Vega]
ICGC DataPortalENSG00000276430
TCGA cBioPortalFAM25C
AceView (NCBI)FAM25C
Genatlas (Paris)FAM25C
WikiGenes644054
SOURCE (Princeton)FAM25C
Genetics Home Reference (NIH)FAM25C
Genomic and cartography
GoldenPath hg19 (UCSC)FAM25C  -     chr10:48247662-48252143 +  10q11.22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM25C  -     10q11.22   [Description]    (hg38-Dec_2013)
EnsemblFAM25C - 10q11.22 [CytoView hg19]  FAM25C - 10q11.22 [CytoView hg38]
Mapping of homologs : NCBIFAM25C [Mapview hg19]  FAM25C [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC127791 BC146955 BC146972 BC146989 BC146990
RefSeq transcript (Entrez)NM_001137548
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)FAM25C
Cluster EST : UnigeneHs.723078 [ NCBI ]
CGAP (NCI)Hs.723078
Alternative Splicing GalleryENSG00000276430
Gene ExpressionFAM25C [ NCBI-GEO ]   FAM25C [ EBI - ARRAY_EXPRESS ]   FAM25C [ SEEK ]   FAM25C [ MEM ]
Gene Expression Viewer (FireBrowse)FAM25C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)644054
GTEX Portal (Tissue expression)FAM25C
Protein : pattern, domain, 3D structure
UniProt/SwissProtB3EWG5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB3EWG5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB3EWG5
Splice isoforms : SwissVarB3EWG5
PhosPhoSitePlusB3EWG5
Domains : Interpro (EBI)FAM25   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM25C
DMDM Disease mutations644054
Blocks (Seattle)FAM25C
SuperfamilyB3EWG5
Human Protein AtlasENSG00000276430
Peptide AtlasB3EWG5
Protein Interaction databases
DIP (DOE-UCLA)B3EWG5
IntAct (EBI)B3EWG5
FunCoupENSG00000276430
BioGRIDFAM25C
STRING (EMBL)FAM25C
ZODIACFAM25C
Ontologies - Pathways
QuickGOB3EWG5
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM25C
Atlas of Cancer Signalling NetworkFAM25C
Wikipedia pathwaysFAM25C
Orthology - Evolution
OrthoDB644054
GeneTree (enSembl)ENSG00000276430
Phylogenetic Trees/Animal Genes : TreeFamFAM25C
HOVERGENB3EWG5
HOGENOMB3EWG5
Homologs : HomoloGeneFAM25C
Homology/Alignments : Family Browser (UCSC)FAM25C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM25C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM25C
dbVarFAM25C
ClinVarFAM25C
1000_GenomesFAM25C 
Exome Variant ServerFAM25C
ExAC (Exome Aggregation Consortium)FAM25C (select the gene name)
Genetic variants : HAPMAP644054
Genomic Variants (DGV)FAM25C [DGVbeta]
DECIPHER (Syndromes)10:48247662-48252143  ENSG00000276430
CONAN: Copy Number AnalysisFAM25C 
Mutations
ICGC Data PortalFAM25C 
TCGA Data PortalFAM25C 
Broad Tumor PortalFAM25C
OASIS PortalFAM25C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM25C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM25C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM25C
DgiDB (Drug Gene Interaction Database)FAM25C
DoCM (Curated mutations)FAM25C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM25C (select a term)
intoGenFAM25C
Cancer3DFAM25C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM25C
Genetic Testing Registry FAM25C
NextProtB3EWG5 [Medical]
TSGene644054
GENETestsFAM25C
Huge Navigator FAM25C [HugePedia]
snp3D : Map Gene to Disease644054
BioCentury BCIQFAM25C
ClinGenFAM25C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644054
Chemical/Pharm GKB GenePA134868713
Clinical trialFAM25C
Miscellaneous
canSAR (ICR)FAM25C (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM25C
EVEXFAM25C
GoPubMedFAM25C
iHOPFAM25C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:04:05 CET 2017

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