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FAM25G (family with sequence similarity 25, member G)

Identity

Alias_namesfamily with sequence similarity 25, member G
Alias_symbol (synonym)bA301J7.4
Other aliasFAM25A
FAM25B
FAM25C
HGNC (Hugo) FAM25G
LocusID (NCBI) 100133093
Atlas_Id 63181
Location 10q11.22  [Link to chromosome band 10q11]
Location_base_pair Starts at 48247662 and ends at 48252125 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM25G   23590
Cards
Entrez_Gene (NCBI)FAM25G  100133093  family with sequence similarity 25, member G
AliasesFAM25A; FAM25B; FAM25C; bA301J7.4
GeneCards (Weizmann)FAM25G
Ensembl hg19 (Hinxton)ENSG00000189090 [Gene_View]  chr10:48247662-48252125 [Contig_View]  FAM25G [Vega]
Ensembl hg38 (Hinxton)ENSG00000189090 [Gene_View]  chr10:48247662-48252125 [Contig_View]  FAM25G [Vega]
ICGC DataPortalENSG00000189090
TCGA cBioPortalFAM25G
AceView (NCBI)FAM25G
Genatlas (Paris)FAM25G
WikiGenes100133093
SOURCE (Princeton)FAM25G
Genetics Home Reference (NIH)FAM25G
Genomic and cartography
GoldenPath hg19 (UCSC)FAM25G  -     chr10:48247662-48252125 +  10q11.22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM25G  -     10q11.22   [Description]    (hg38-Dec_2013)
EnsemblFAM25G - 10q11.22 [CytoView hg19]  FAM25G - 10q11.22 [CytoView hg38]
Mapping of homologs : NCBIFAM25G [Mapview hg19]  FAM25G [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001137549
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929375
Consensus coding sequences : CCDS (NCBI)FAM25G
Cluster EST : UnigeneHs.723078 [ NCBI ]
CGAP (NCI)Hs.723078
Alternative Splicing GalleryENSG00000189090
Gene ExpressionFAM25G [ NCBI-GEO ]   FAM25G [ EBI - ARRAY_EXPRESS ]   FAM25G [ SEEK ]   FAM25G [ MEM ]
Gene Expression Viewer (FireBrowse)FAM25G [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100133093
GTEX Portal (Tissue expression)FAM25G
Protein : pattern, domain, 3D structure
UniProt/SwissProtB3EWG6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB3EWG6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB3EWG6
Splice isoforms : SwissVarB3EWG6
PhosPhoSitePlusB3EWG6
Domains : Interpro (EBI)FAM25   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM25G
DMDM Disease mutations100133093
Blocks (Seattle)FAM25G
SuperfamilyB3EWG6
Human Protein AtlasENSG00000189090
Peptide AtlasB3EWG6
Protein Interaction databases
DIP (DOE-UCLA)B3EWG6
IntAct (EBI)B3EWG6
FunCoupENSG00000189090
BioGRIDFAM25G
STRING (EMBL)FAM25G
ZODIACFAM25G
Ontologies - Pathways
QuickGOB3EWG6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM25G
Atlas of Cancer Signalling NetworkFAM25G
Wikipedia pathwaysFAM25G
Orthology - Evolution
OrthoDB100133093
GeneTree (enSembl)ENSG00000189090
Phylogenetic Trees/Animal Genes : TreeFamFAM25G
HOVERGENB3EWG6
HOGENOMB3EWG6
Homologs : HomoloGeneFAM25G
Homology/Alignments : Family Browser (UCSC)FAM25G
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM25G [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM25G
dbVarFAM25G
ClinVarFAM25G
1000_GenomesFAM25G 
Exome Variant ServerFAM25G
ExAC (Exome Aggregation Consortium)FAM25G (select the gene name)
Genetic variants : HAPMAP100133093
Genomic Variants (DGV)FAM25G [DGVbeta]
DECIPHER (Syndromes)10:48247662-48252125  ENSG00000189090
CONAN: Copy Number AnalysisFAM25G 
Mutations
ICGC Data PortalFAM25G 
TCGA Data PortalFAM25G 
Broad Tumor PortalFAM25G
OASIS PortalFAM25G [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM25G  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM25G
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM25G
DgiDB (Drug Gene Interaction Database)FAM25G
DoCM (Curated mutations)FAM25G (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM25G (select a term)
intoGenFAM25G
Cancer3DFAM25G(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM25G
Genetic Testing Registry FAM25G
NextProtB3EWG6 [Medical]
TSGene100133093
GENETestsFAM25G
Huge Navigator FAM25G [HugePedia]
snp3D : Map Gene to Disease100133093
BioCentury BCIQFAM25G
ClinGenFAM25G
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100133093
Chemical/Pharm GKB GenePA134883769
Clinical trialFAM25G
Miscellaneous
canSAR (ICR)FAM25G (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM25G
EVEXFAM25G
GoPubMedFAM25G
iHOPFAM25G
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:04:06 CET 2017

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