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FAM26E (family with sequence similarity 26 member E)

Identity

Alias_namesC6orf188
chromosome 6 open reading frame 188
family with sequence similarity 26, member E
Alias_symbol (synonym)dJ493F7.3
MGC45451
Other alias
HGNC (Hugo) FAM26E
LocusID (NCBI) 254228
Atlas_Id 63183
Location 6q22.1  [Link to chromosome band 6q22]
Location_base_pair Starts at 116511645 and ends at 116524792 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM26E   21568
Cards
Entrez_Gene (NCBI)FAM26E  254228  family with sequence similarity 26 member E
AliasesC6orf188; dJ493F7.3
GeneCards (Weizmann)FAM26E
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:116511645-116524792 [Contig_View]  FAM26E [Vega]
TCGA cBioPortalFAM26E
AceView (NCBI)FAM26E
Genatlas (Paris)FAM26E
WikiGenes254228
SOURCE (Princeton)FAM26E
Genetics Home Reference (NIH)FAM26E
Genomic and cartography
GoldenPath hg38 (UCSC)FAM26E  -     chr6:116511645-116524792 +  6q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM26E  -     6q22.1   [Description]    (hg19-Feb_2009)
EnsemblFAM26E - 6q22.1 [CytoView hg19]  FAM26E - 6q22.1 [CytoView hg38]
Mapping of homologs : NCBIFAM26E [Mapview hg19]  FAM26E [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA468683 AK023730 AK094140 AK315572 BC032556
RefSeq transcript (Entrez)NM_153711
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM26E
Cluster EST : UnigeneHs.660142 [ NCBI ]
CGAP (NCI)Hs.660142
Gene ExpressionFAM26E [ NCBI-GEO ]   FAM26E [ EBI - ARRAY_EXPRESS ]   FAM26E [ SEEK ]   FAM26E [ MEM ]
Gene Expression Viewer (FireBrowse)FAM26E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)254228
GTEX Portal (Tissue expression)FAM26E
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N5C1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N5C1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N5C1
Splice isoforms : SwissVarQ8N5C1
PhosPhoSitePlusQ8N5C1
Domains : Interpro (EBI)FAM26    FAM26E   
Domain families : Pfam (Sanger)Ca_hom_mod (PF14798)   
Domain families : Pfam (NCBI)pfam14798   
Conserved Domain (NCBI)FAM26E
DMDM Disease mutations254228
Blocks (Seattle)FAM26E
SuperfamilyQ8N5C1
Peptide AtlasQ8N5C1
HPRD12868
IPIIPI00166835   
Protein Interaction databases
DIP (DOE-UCLA)Q8N5C1
IntAct (EBI)Q8N5C1
BioGRIDFAM26E
STRING (EMBL)FAM26E
ZODIACFAM26E
Ontologies - Pathways
QuickGOQ8N5C1
Ontology : AmiGOcation channel activity  integral component of plasma membrane  ion transmembrane transport  extracellular exosome  cation transmembrane transport  
Ontology : EGO-EBIcation channel activity  integral component of plasma membrane  ion transmembrane transport  extracellular exosome  cation transmembrane transport  
NDEx NetworkFAM26E
Atlas of Cancer Signalling NetworkFAM26E
Wikipedia pathwaysFAM26E
Orthology - Evolution
OrthoDB254228
Phylogenetic Trees/Animal Genes : TreeFamFAM26E
HOVERGENQ8N5C1
HOGENOMQ8N5C1
Homologs : HomoloGeneFAM26E
Homology/Alignments : Family Browser (UCSC)FAM26E
Gene fusions - Rearrangements
Fusion : QuiverFAM26E
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM26E [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM26E
dbVarFAM26E
ClinVarFAM26E
1000_GenomesFAM26E 
Exome Variant ServerFAM26E
Varsome BrowserFAM26E
Genetic variants : HAPMAP254228
Genomic Variants (DGV)FAM26E [DGVbeta]
DECIPHERFAM26E [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM26E 
Mutations
ICGC Data PortalFAM26E 
TCGA Data PortalFAM26E 
Broad Tumor PortalFAM26E
OASIS PortalFAM26E [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM26E  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM26E
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM26E
DgiDB (Drug Gene Interaction Database)FAM26E
DoCM (Curated mutations)FAM26E (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM26E (select a term)
intoGenFAM26E
Cancer3DFAM26E(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETFAM26E
MedgenFAM26E
Genetic Testing Registry FAM26E
NextProtQ8N5C1 [Medical]
TSGene254228
GENETestsFAM26E
Target ValidationFAM26E
Huge Navigator FAM26E [HugePedia]
snp3D : Map Gene to Disease254228
BioCentury BCIQFAM26E
ClinGenFAM26E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD254228
Chemical/Pharm GKB GenePA162387635
Clinical trialFAM26E
Miscellaneous
canSAR (ICR)FAM26E (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM26E
EVEXFAM26E
GoPubMedFAM26E
iHOPFAM26E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:45:18 CEST 2018

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