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FAM58DP (family with sequence similarity 58 member D, pseudogene)

Identity

Alias_namesfamily with sequence similarity 58, member D, pseudogene
Other alias-
HGNC (Hugo) FAM58DP
LocusID (NCBI) 100421566
Atlas_Id 77420
Location 13q12.11  [Link to chromosome band 13q12]
Location_base_pair Starts at 19382208 and ends at 19383385 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)FAM58DP   42022
Cards
Entrez_Gene (NCBI)FAM58DP  100421566  family with sequence similarity 58 member D, pseudogene
Aliases
GeneCards (Weizmann)FAM58DP
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:19382208-19383385 [Contig_View]  FAM58DP [Vega]
TCGA cBioPortalFAM58DP
AceView (NCBI)FAM58DP
Genatlas (Paris)FAM58DP
WikiGenes100421566
SOURCE (Princeton)FAM58DP
Genetics Home Reference (NIH)FAM58DP
Genomic and cartography
GoldenPath hg38 (UCSC)FAM58DP  -     chr13:19382208-19383385 +  13q12.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM58DP  -     13q12.11   [Description]    (hg19-Feb_2009)
EnsemblFAM58DP - 13q12.11 [CytoView hg19]  FAM58DP - 13q12.11 [CytoView hg38]
Mapping of homologs : NCBIFAM58DP [Mapview hg19]  FAM58DP [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC157839
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM58DP
Gene ExpressionFAM58DP [ NCBI-GEO ]   FAM58DP [ EBI - ARRAY_EXPRESS ]   FAM58DP [ SEEK ]   FAM58DP [ MEM ]
Gene Expression Viewer (FireBrowse)FAM58DP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100421566
GTEX Portal (Tissue expression)FAM58DP
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM58DP
DMDM Disease mutations100421566
Blocks (Seattle)FAM58DP
Protein Interaction databases
BioGRIDFAM58DP
STRING (EMBL)FAM58DP
ZODIACFAM58DP
Ontologies - Pathways
Huge Navigator FAM58DP [HugePedia]
snp3D : Map Gene to Disease100421566
BioCentury BCIQFAM58DP
ClinGenFAM58DP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100421566
Clinical trialFAM58DP
Miscellaneous
canSAR (ICR)FAM58DP (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM58DP
EVEXFAM58DP
GoPubMedFAM58DP
iHOPFAM58DP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:27:59 CET 2017

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