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FAM69C (family with sequence similarity 69 member C)

Identity

Alias_namesC18orf51
chromosome 18 open reading frame 51
family with sequence similarity 69, member C
Other alias
HGNC (Hugo) FAM69C
LocusID (NCBI) 125704
Atlas_Id 63226
Location 18q22.3  [Link to chromosome band 18q22]
Location_base_pair Starts at 74435728 and ends at 74457268 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM69C   31729
Cards
Entrez_Gene (NCBI)FAM69C  125704  family with sequence similarity 69 member C
AliasesC18orf51
GeneCards (Weizmann)FAM69C
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr18:74435728-74457268 [Contig_View]  FAM69C [Vega]
TCGA cBioPortalFAM69C
AceView (NCBI)FAM69C
Genatlas (Paris)FAM69C
WikiGenes125704
SOURCE (Princeton)FAM69C
Genetics Home Reference (NIH)FAM69C
Genomic and cartography
GoldenPath hg38 (UCSC)FAM69C  -     chr18:74435728-74457268 -  18q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM69C  -     18q22.3   [Description]    (hg19-Feb_2009)
EnsemblFAM69C - 18q22.3 [CytoView hg19]  FAM69C - 18q22.3 [CytoView hg38]
Mapping of homologs : NCBIFAM69C [Mapview hg19]  FAM69C [Mapview hg38]
OMIM614544   
Gene and transcription
Genbank (Entrez)AI375747 BC019628
RefSeq transcript (Entrez)NM_001044369
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM69C
Cluster EST : UnigeneHs.371690 [ NCBI ]
CGAP (NCI)Hs.371690
Gene ExpressionFAM69C [ NCBI-GEO ]   FAM69C [ EBI - ARRAY_EXPRESS ]   FAM69C [ SEEK ]   FAM69C [ MEM ]
Gene Expression Viewer (FireBrowse)FAM69C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)125704
GTEX Portal (Tissue expression)FAM69C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ0P6D2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ0P6D2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ0P6D2
Splice isoforms : SwissVarQ0P6D2
PhosPhoSitePlusQ0P6D2
Domains : Interpro (EBI)FAM69_kinase_dom    FAM69_N    Kinase-like_dom   
Domain families : Pfam (Sanger)PIP49_C (PF12260)    PIP49_N (PF14875)   
Domain families : Pfam (NCBI)pfam12260    pfam14875   
Domain families : Smart (EMBL)PIP49_N (SM01299)  
Conserved Domain (NCBI)FAM69C
DMDM Disease mutations125704
Blocks (Seattle)FAM69C
SuperfamilyQ0P6D2
Peptide AtlasQ0P6D2
IPIIPI00926509   IPI00845367   
Protein Interaction databases
DIP (DOE-UCLA)Q0P6D2
IntAct (EBI)Q0P6D2
BioGRIDFAM69C
STRING (EMBL)FAM69C
ZODIACFAM69C
Ontologies - Pathways
QuickGOQ0P6D2
Ontology : AmiGOendoplasmic reticulum membrane  integral component of membrane  
Ontology : EGO-EBIendoplasmic reticulum membrane  integral component of membrane  
NDEx NetworkFAM69C
Atlas of Cancer Signalling NetworkFAM69C
Wikipedia pathwaysFAM69C
Orthology - Evolution
OrthoDB125704
Phylogenetic Trees/Animal Genes : TreeFamFAM69C
HOVERGENQ0P6D2
HOGENOMQ0P6D2
Homologs : HomoloGeneFAM69C
Homology/Alignments : Family Browser (UCSC)FAM69C
Gene fusions - Rearrangements
Tumor Fusion PortalFAM69C
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM69C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM69C
dbVarFAM69C
ClinVarFAM69C
1000_GenomesFAM69C 
Exome Variant ServerFAM69C
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP125704
Genomic Variants (DGV)FAM69C [DGVbeta]
DECIPHERFAM69C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM69C 
Mutations
ICGC Data PortalFAM69C 
TCGA Data PortalFAM69C 
Broad Tumor PortalFAM69C
OASIS PortalFAM69C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM69C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM69C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM69C
DgiDB (Drug Gene Interaction Database)FAM69C
DoCM (Curated mutations)FAM69C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM69C (select a term)
intoGenFAM69C
Cancer3DFAM69C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614544   
Orphanet
DisGeNETFAM69C
MedgenFAM69C
Genetic Testing Registry FAM69C
NextProtQ0P6D2 [Medical]
TSGene125704
GENETestsFAM69C
Target ValidationFAM69C
Huge Navigator FAM69C [HugePedia]
snp3D : Map Gene to Disease125704
BioCentury BCIQFAM69C
ClinGenFAM69C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD125704
Chemical/Pharm GKB GenePA165428999
Clinical trialFAM69C
Miscellaneous
canSAR (ICR)FAM69C (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM69C
EVEXFAM69C
GoPubMedFAM69C
iHOPFAM69C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:37:29 CET 2017

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