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FAM74A4 (family with sequence similarity 74 member A4)

Identity

Alias_namesfamily with sequence similarity 74, member A4
Alias_symbol (synonym)FLJ45202
Other aliasFAM74A2
HGNC (Hugo) FAM74A4
LocusID (NCBI) 401508
Atlas_Id 63241
Location 9q12  [Link to chromosome band 9q12]
Location_base_pair Starts at 61205398 and ends at 61212373 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM74A4   32032
Cards
Entrez_Gene (NCBI)FAM74A4  401508  family with sequence similarity 74 member A4
AliasesFAM74A2
GeneCards (Weizmann)FAM74A4
Ensembl hg19 (Hinxton)ENSG00000274583 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000274583 [Gene_View]  chr9:61205398-61212373 [Contig_View]  FAM74A4 [Vega]
ICGC DataPortalENSG00000274583
TCGA cBioPortalFAM74A4
AceView (NCBI)FAM74A4
Genatlas (Paris)FAM74A4
WikiGenes401508
SOURCE (Princeton)FAM74A4
Genetics Home Reference (NIH)FAM74A4
Genomic and cartography
GoldenPath hg38 (UCSC)FAM74A4  -     chr9:61205398-61212373 +  9q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM74A4  -     9q12   [Description]    (hg19-Feb_2009)
EnsemblFAM74A4 - 9q12 [CytoView hg19]  FAM74A4 - 9q12 [CytoView hg38]
Mapping of homologs : NCBIFAM74A4 [Mapview hg19]  FAM74A4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK127145 BC121813
RefSeq transcript (Entrez)NM_207507
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM74A4
Cluster EST : UnigeneHs.742601 [ NCBI ]
CGAP (NCI)Hs.742601
Alternative Splicing GalleryENSG00000274583
Gene ExpressionFAM74A4 [ NCBI-GEO ]   FAM74A4 [ EBI - ARRAY_EXPRESS ]   FAM74A4 [ SEEK ]   FAM74A4 [ MEM ]
Gene Expression Viewer (FireBrowse)FAM74A4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401508
GTEX Portal (Tissue expression)FAM74A4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5TZK3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5TZK3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5TZK3
Splice isoforms : SwissVarQ5TZK3
PhosPhoSitePlusQ5TZK3
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM74A4
DMDM Disease mutations401508
Blocks (Seattle)FAM74A4
SuperfamilyQ5TZK3
Human Protein AtlasENSG00000274583
Peptide AtlasQ5TZK3
HPRD16982
IPIIPI00479310   
Protein Interaction databases
DIP (DOE-UCLA)Q5TZK3
IntAct (EBI)Q5TZK3
FunCoupENSG00000274583
BioGRIDFAM74A4
STRING (EMBL)FAM74A4
ZODIACFAM74A4
Ontologies - Pathways
QuickGOQ5TZK3
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkFAM74A4
Atlas of Cancer Signalling NetworkFAM74A4
Wikipedia pathwaysFAM74A4
Orthology - Evolution
OrthoDB401508
GeneTree (enSembl)ENSG00000274583
Phylogenetic Trees/Animal Genes : TreeFamFAM74A4
HOVERGENQ5TZK3
HOGENOMQ5TZK3
Homologs : HomoloGeneFAM74A4
Homology/Alignments : Family Browser (UCSC)FAM74A4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM74A4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM74A4
dbVarFAM74A4
ClinVarFAM74A4
1000_GenomesFAM74A4 
Exome Variant ServerFAM74A4
ExAC (Exome Aggregation Consortium)FAM74A4 (select the gene name)
Genetic variants : HAPMAP401508
Genomic Variants (DGV)FAM74A4 [DGVbeta]
DECIPHERFAM74A4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM74A4 
Mutations
ICGC Data PortalFAM74A4 
TCGA Data PortalFAM74A4 
Broad Tumor PortalFAM74A4
OASIS PortalFAM74A4 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM74A4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM74A4
DgiDB (Drug Gene Interaction Database)FAM74A4
DoCM (Curated mutations)FAM74A4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM74A4 (select a term)
intoGenFAM74A4
Cancer3DFAM74A4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM74A4
Genetic Testing Registry FAM74A4
NextProtQ5TZK3 [Medical]
TSGene401508
GENETestsFAM74A4
Target ValidationFAM74A4
Huge Navigator FAM74A4 [HugePedia]
snp3D : Map Gene to Disease401508
BioCentury BCIQFAM74A4
ClinGenFAM74A4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401508
Chemical/Pharm GKB GenePA145148916
Clinical trialFAM74A4
Miscellaneous
canSAR (ICR)FAM74A4 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM74A4
EVEXFAM74A4
GoPubMedFAM74A4
iHOPFAM74A4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:08:11 CEST 2017

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