Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

FAM74A6 (family with sequence similarity 74 member A6)

Identity

Alias_namesfamily with sequence similarity 74, member A6
Other alias-
HGNC (Hugo) FAM74A6
LocusID (NCBI) 653123
Atlas_Id 63242
Location 9q12  [Link to chromosome band 9q12]
Location_base_pair Starts at 60929782 and ends at 60935727 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM74A6   34036
Cards
Entrez_Gene (NCBI)FAM74A6  653123  family with sequence similarity 74 member A6
Aliases
GeneCards (Weizmann)FAM74A6
Ensembl hg19 (Hinxton)ENSG00000274516 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000274516 [Gene_View]  chr9:60929782-60935727 [Contig_View]  FAM74A6 [Vega]
ICGC DataPortalENSG00000274516
TCGA cBioPortalFAM74A6
AceView (NCBI)FAM74A6
Genatlas (Paris)FAM74A6
WikiGenes653123
SOURCE (Princeton)FAM74A6
Genetics Home Reference (NIH)FAM74A6
Genomic and cartography
GoldenPath hg38 (UCSC)FAM74A6  -     chr9:60929782-60935727 +  9q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM74A6  -     9q12   [Description]    (hg19-Feb_2009)
EnsemblFAM74A6 - 9q12 [CytoView hg19]  FAM74A6 - 9q12 [CytoView hg38]
Mapping of homologs : NCBIFAM74A6 [Mapview hg19]  FAM74A6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM74A6
Alternative Splicing GalleryENSG00000274516
Gene ExpressionFAM74A6 [ NCBI-GEO ]   FAM74A6 [ EBI - ARRAY_EXPRESS ]   FAM74A6 [ SEEK ]   FAM74A6 [ MEM ]
Gene Expression Viewer (FireBrowse)FAM74A6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)653123
GTEX Portal (Tissue expression)FAM74A6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5TZK3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5TZK3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5TZK3
Splice isoforms : SwissVarQ5TZK3
PhosPhoSitePlusQ5TZK3
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM74A6
DMDM Disease mutations653123
Blocks (Seattle)FAM74A6
SuperfamilyQ5TZK3
Human Protein AtlasENSG00000274516
Peptide AtlasQ5TZK3
Protein Interaction databases
DIP (DOE-UCLA)Q5TZK3
IntAct (EBI)Q5TZK3
FunCoupENSG00000274516
BioGRIDFAM74A6
STRING (EMBL)FAM74A6
ZODIACFAM74A6
Ontologies - Pathways
QuickGOQ5TZK3
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM74A6
Atlas of Cancer Signalling NetworkFAM74A6
Wikipedia pathwaysFAM74A6
Orthology - Evolution
OrthoDB653123
GeneTree (enSembl)ENSG00000274516
Phylogenetic Trees/Animal Genes : TreeFamFAM74A6
HOVERGENQ5TZK3
HOGENOMQ5TZK3
Homologs : HomoloGeneFAM74A6
Homology/Alignments : Family Browser (UCSC)FAM74A6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM74A6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM74A6
dbVarFAM74A6
ClinVarFAM74A6
1000_GenomesFAM74A6 
Exome Variant ServerFAM74A6
ExAC (Exome Aggregation Consortium)FAM74A6 (select the gene name)
Genetic variants : HAPMAP653123
Genomic Variants (DGV)FAM74A6 [DGVbeta]
DECIPHERFAM74A6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM74A6 
Mutations
ICGC Data PortalFAM74A6 
TCGA Data PortalFAM74A6 
Broad Tumor PortalFAM74A6
OASIS PortalFAM74A6 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM74A6
BioMutasearch FAM74A6
DgiDB (Drug Gene Interaction Database)FAM74A6
DoCM (Curated mutations)FAM74A6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM74A6 (select a term)
intoGenFAM74A6
Cancer3DFAM74A6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM74A6
Genetic Testing Registry FAM74A6
NextProtQ5TZK3 [Medical]
TSGene653123
GENETestsFAM74A6
Target ValidationFAM74A6
Huge Navigator FAM74A6 [HugePedia]
snp3D : Map Gene to Disease653123
BioCentury BCIQFAM74A6
ClinGenFAM74A6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653123
Clinical trialFAM74A6
Miscellaneous
canSAR (ICR)FAM74A6 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM74A6
EVEXFAM74A6
GoPubMedFAM74A6
iHOPFAM74A6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:48:44 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.