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FAM81A (family with sequence similarity 81 member A)

Identity

Alias_namesfamily with sequence similarity 81, member A
Alias_symbol (synonym)MGC26690
Other alias-
HGNC (Hugo) FAM81A
LocusID (NCBI) 145773
Atlas_Id 63247
Location 15q22.2  [Link to chromosome band 15q22]
Location_base_pair Starts at 59438173 and ends at 59523552 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
GNAO1 (16q12.2) / FAM81A (15q22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM81A   28379
Cards
Entrez_Gene (NCBI)FAM81A  145773  family with sequence similarity 81 member A
Aliases
GeneCards (Weizmann)FAM81A
Ensembl hg19 (Hinxton)ENSG00000157470 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000157470 [Gene_View]  chr15:59438173-59523552 [Contig_View]  FAM81A [Vega]
ICGC DataPortalENSG00000157470
TCGA cBioPortalFAM81A
AceView (NCBI)FAM81A
Genatlas (Paris)FAM81A
WikiGenes145773
SOURCE (Princeton)FAM81A
Genetics Home Reference (NIH)FAM81A
Genomic and cartography
GoldenPath hg38 (UCSC)FAM81A  -     chr15:59438173-59523552 +  15q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM81A  -     15q22.2   [Description]    (hg19-Feb_2009)
EnsemblFAM81A - 15q22.2 [CytoView hg19]  FAM81A - 15q22.2 [CytoView hg38]
Mapping of homologs : NCBIFAM81A [Mapview hg19]  FAM81A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK299220 AK307975 AL110257 BC022537
RefSeq transcript (Entrez)NM_152450
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM81A
Cluster EST : UnigeneHs.531168 [ NCBI ]
CGAP (NCI)Hs.531168
Alternative Splicing GalleryENSG00000157470
Gene ExpressionFAM81A [ NCBI-GEO ]   FAM81A [ EBI - ARRAY_EXPRESS ]   FAM81A [ SEEK ]   FAM81A [ MEM ]
Gene Expression Viewer (FireBrowse)FAM81A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)145773
GTEX Portal (Tissue expression)FAM81A
Human Protein AtlasENSG00000157470-FAM81A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TBF8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TBF8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TBF8
Splice isoforms : SwissVarQ8TBF8
PhosPhoSitePlusQ8TBF8
Domains : Interpro (EBI)FAM81    FAM81A   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM81A
DMDM Disease mutations145773
Blocks (Seattle)FAM81A
SuperfamilyQ8TBF8
Human Protein Atlas [tissue]ENSG00000157470-FAM81A [tissue]
Peptide AtlasQ8TBF8
HPRD14508
IPIIPI00290755   IPI00909186   
Protein Interaction databases
DIP (DOE-UCLA)Q8TBF8
IntAct (EBI)Q8TBF8
FunCoupENSG00000157470
BioGRIDFAM81A
STRING (EMBL)FAM81A
ZODIACFAM81A
Ontologies - Pathways
QuickGOQ8TBF8
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM81A
Atlas of Cancer Signalling NetworkFAM81A
Wikipedia pathwaysFAM81A
Orthology - Evolution
OrthoDB145773
GeneTree (enSembl)ENSG00000157470
Phylogenetic Trees/Animal Genes : TreeFamFAM81A
HOVERGENQ8TBF8
HOGENOMQ8TBF8
Homologs : HomoloGeneFAM81A
Homology/Alignments : Family Browser (UCSC)FAM81A
Gene fusions - Rearrangements
Fusion: Tumor Portal FAM81A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM81A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM81A
dbVarFAM81A
ClinVarFAM81A
1000_GenomesFAM81A 
Exome Variant ServerFAM81A
ExAC (Exome Aggregation Consortium)ENSG00000157470
GNOMAD BrowserENSG00000157470
Genetic variants : HAPMAP145773
Genomic Variants (DGV)FAM81A [DGVbeta]
DECIPHERFAM81A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM81A 
Mutations
ICGC Data PortalFAM81A 
TCGA Data PortalFAM81A 
Broad Tumor PortalFAM81A
OASIS PortalFAM81A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM81A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM81A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM81A
DgiDB (Drug Gene Interaction Database)FAM81A
DoCM (Curated mutations)FAM81A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM81A (select a term)
intoGenFAM81A
Cancer3DFAM81A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM81A
Genetic Testing Registry FAM81A
NextProtQ8TBF8 [Medical]
TSGene145773
GENETestsFAM81A
Target ValidationFAM81A
Huge Navigator FAM81A [HugePedia]
snp3D : Map Gene to Disease145773
BioCentury BCIQFAM81A
ClinGenFAM81A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD145773
Chemical/Pharm GKB GenePA142671846
Clinical trialFAM81A
Miscellaneous
canSAR (ICR)FAM81A (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM81A
EVEXFAM81A
GoPubMedFAM81A
iHOPFAM81A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:47:21 CET 2017

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