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FAM81B (family with sequence similarity 81 member B)

Identity

Alias (NCBI)-
HGNC (Hugo) FAM81B
HGNC Alias symbFLJ25333
HGNC Previous namefamily with sequence similarity 81, member B
LocusID (NCBI) 153643
Atlas_Id 63248
Location 5q15  [Link to chromosome band 5q15]
Location_base_pair Starts at 95391366 and ends at 95450441 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FAM81B (5q15) / FAM81B (5q15)FAM81B (5q15) / MALAT1 (11q13.1)TMEM161B (5q14.3) / FAM81B (5q15)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

 

Nomenclature
HGNC (Hugo)FAM81B   26335
Cards
Entrez_Gene (NCBI)FAM81B    family with sequence similarity 81 member B
Aliases
GeneCards (Weizmann)FAM81B
Ensembl hg19 (Hinxton)ENSG00000153347 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000153347 [Gene_View]  ENSG00000153347 [Sequence]  chr5:95391366-95450441 [Contig_View]  FAM81B [Vega]
ICGC DataPortalENSG00000153347
TCGA cBioPortalFAM81B
AceView (NCBI)FAM81B
Genatlas (Paris)FAM81B
SOURCE (Princeton)FAM81B
Genetics Home Reference (NIH)FAM81B
Genomic and cartography
GoldenPath hg38 (UCSC)FAM81B  -     chr5:95391366-95450441 +  5q15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM81B  -     5q15   [Description]    (hg19-Feb_2009)
GoldenPathFAM81B - 5q15 [CytoView hg19]  FAM81B - 5q15 [CytoView hg38]
ImmunoBaseENSG00000153347
Genome Data Viewer NCBIFAM81B [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK058062 AK310245 BC034772 BM560335
RefSeq transcript (Entrez)NM_152548
Consensus coding sequences : CCDS (NCBI)FAM81B
Gene ExpressionFAM81B [ NCBI-GEO ]   FAM81B [ EBI - ARRAY_EXPRESS ]   FAM81B [ SEEK ]   FAM81B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM81B [ Firebrowse - Broad ]
GenevisibleExpression of FAM81B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)153643
GTEX Portal (Tissue expression)FAM81B
Human Protein AtlasENSG00000153347-FAM81B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96LP2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96LP2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96LP2
PhosPhoSitePlusQ96LP2
Domains : Interpro (EBI)FAM81    FAM81B   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM81B
SuperfamilyQ96LP2
AlphaFold pdb e-kbQ96LP2   
Human Protein Atlas [tissue]ENSG00000153347-FAM81B [tissue]
HPRD08686
Protein Interaction databases
DIP (DOE-UCLA)Q96LP2
IntAct (EBI)Q96LP2
BioGRIDFAM81B
STRING (EMBL)FAM81B
ZODIACFAM81B
Ontologies - Pathways
QuickGOQ96LP2
Ontology : AmiGOprotein binding  nucleus  
Ontology : EGO-EBIprotein binding  nucleus  
NDEx NetworkFAM81B
Atlas of Cancer Signalling NetworkFAM81B
Wikipedia pathwaysFAM81B
Orthology - Evolution
OrthoDB153643
GeneTree (enSembl)ENSG00000153347
Phylogenetic Trees/Animal Genes : TreeFamFAM81B
Homologs : HomoloGeneFAM81B
Homology/Alignments : Family Browser (UCSC)FAM81B
Gene fusions - Rearrangements
Fusion : QuiverFAM81B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM81B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM81B
dbVarFAM81B
ClinVarFAM81B
MonarchFAM81B
1000_GenomesFAM81B 
Exome Variant ServerFAM81B
GNOMAD BrowserENSG00000153347
Varsome BrowserFAM81B
ACMGFAM81B variants
VarityQ96LP2
Genomic Variants (DGV)FAM81B [DGVbeta]
DECIPHERFAM81B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM81B 
Mutations
ICGC Data PortalFAM81B 
TCGA Data PortalFAM81B 
Broad Tumor PortalFAM81B
OASIS PortalFAM81B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM81B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DFAM81B
Mutations and Diseases : HGMDFAM81B
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaFAM81B
DgiDB (Drug Gene Interaction Database)FAM81B
DoCM (Curated mutations)FAM81B
CIViC (Clinical Interpretations of Variants in Cancer)FAM81B
Cancer3DFAM81B
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETFAM81B
MedgenFAM81B
Genetic Testing Registry FAM81B
NextProtQ96LP2 [Medical]
GENETestsFAM81B
Target ValidationFAM81B
Huge Navigator FAM81B [HugePedia]
ClinGenFAM81B
Clinical trials, drugs, therapy
MyCancerGenomeFAM81B
Protein Interactions : CTDFAM81B
Pharm GKB GenePA142671847
PharosQ96LP2
Clinical trialFAM81B
Miscellaneous
canSAR (ICR)FAM81B
HarmonizomeFAM81B
DataMed IndexFAM81B
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFAM81B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:50:11 CEST 2021
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