Atlas of Genetics and Cytogenetics in Oncology and Haematology


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FAM83A-AS1 (FAM83A antisense RNA 1)

Identity

Alias_symbol (synonym)HCCC11
Other aliasHCCC11_v1
HCCC11_v2
HGNC (Hugo) FAM83A-AS1
LocusID (NCBI) 100131726
Atlas_Id 63249
Location 8q24.13  [Link to chromosome band 8q24]
Location_base_pair Starts at 123201172 and ends at 123202743 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM83A-AS1   48658
Cards
Entrez_Gene (NCBI)FAM83A-AS1  100131726  FAM83A antisense RNA 1
AliasesHCCC11; HCCC11_v1; HCCC11_v2
GeneCards (Weizmann)FAM83A-AS1
Ensembl hg19 (Hinxton)ENSG00000204949 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204949 [Gene_View]  chr8:123201172-123202743 [Contig_View]  FAM83A-AS1 [Vega]
ICGC DataPortalENSG00000204949
TCGA cBioPortalFAM83A-AS1
AceView (NCBI)FAM83A-AS1
Genatlas (Paris)FAM83A-AS1
WikiGenes100131726
SOURCE (Princeton)FAM83A-AS1
Genetics Home Reference (NIH)FAM83A-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)FAM83A-AS1  -     chr8:123201172-123202743 -  8q24.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM83A-AS1  -     8q24.13   [Description]    (hg19-Feb_2009)
EnsemblFAM83A-AS1 - 8q24.13 [CytoView hg19]  FAM83A-AS1 - 8q24.13 [CytoView hg38]
Mapping of homologs : NCBIFAM83A-AS1 [Mapview hg19]  FAM83A-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY211906 AY211907 AY211908 AY225521
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM83A-AS1
Cluster EST : UnigeneHs.660862 [ NCBI ]
CGAP (NCI)Hs.660862
Alternative Splicing GalleryENSG00000204949
Gene ExpressionFAM83A-AS1 [ NCBI-GEO ]   FAM83A-AS1 [ EBI - ARRAY_EXPRESS ]   FAM83A-AS1 [ SEEK ]   FAM83A-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)FAM83A-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100131726
GTEX Portal (Tissue expression)FAM83A-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM83A-AS1
DMDM Disease mutations100131726
Blocks (Seattle)FAM83A-AS1
Human Protein AtlasENSG00000204949
IPIIPI00427304   
Protein Interaction databases
FunCoupENSG00000204949
BioGRIDFAM83A-AS1
STRING (EMBL)FAM83A-AS1
ZODIACFAM83A-AS1
Ontologies - Pathways
Huge Navigator FAM83A-AS1 [HugePedia]
snp3D : Map Gene to Disease100131726
BioCentury BCIQFAM83A-AS1
ClinGenFAM83A-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131726
Clinical trialFAM83A-AS1
Miscellaneous
canSAR (ICR)FAM83A-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM83A-AS1
EVEXFAM83A-AS1
GoPubMedFAM83A-AS1
iHOPFAM83A-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:48:46 CEST 2017

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