Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

FAM83C-AS1 (FAM83C antisense RNA 1)

Identity

Alias_namesC20orf120
NCRNA00154
chromosome 20 open reading frame 120
non-protein coding RNA 154
FAM83C antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)dJ614O4.3
Other alias
HGNC (Hugo) FAM83C-AS1
LocusID (NCBI) 140846
Atlas_Id 63251
Location 20q11.22  [Link to chromosome band 20q11]
Location_base_pair Starts at 35285251 and ends at 35285772 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM83C-AS1   16113
Cards
Entrez_Gene (NCBI)FAM83C-AS1  140846  FAM83C antisense RNA 1
AliasesC20orf120; NCRNA00154; dJ614O4.3
GeneCards (Weizmann)FAM83C-AS1
Ensembl hg19 (Hinxton)ENSG00000235214 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235214 [Gene_View]  chr20:35285251-35285772 [Contig_View]  FAM83C-AS1 [Vega]
ICGC DataPortalENSG00000235214
TCGA cBioPortalFAM83C-AS1
AceView (NCBI)FAM83C-AS1
Genatlas (Paris)FAM83C-AS1
WikiGenes140846
SOURCE (Princeton)FAM83C-AS1
Genetics Home Reference (NIH)FAM83C-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)FAM83C-AS1  -     chr20:35285251-35285772 +  20q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM83C-AS1  -     20q11.22   [Description]    (hg19-Feb_2009)
EnsemblFAM83C-AS1 - 20q11.22 [CytoView hg19]  FAM83C-AS1 - 20q11.22 [CytoView hg38]
Mapping of homologs : NCBIFAM83C-AS1 [Mapview hg19]  FAM83C-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI214830 CB529226
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM83C-AS1
Cluster EST : UnigeneHs.554917 [ NCBI ]
CGAP (NCI)Hs.554917
Alternative Splicing GalleryENSG00000235214
Gene ExpressionFAM83C-AS1 [ NCBI-GEO ]   FAM83C-AS1 [ EBI - ARRAY_EXPRESS ]   FAM83C-AS1 [ SEEK ]   FAM83C-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)FAM83C-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)140846
GTEX Portal (Tissue expression)FAM83C-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM83C-AS1
DMDM Disease mutations140846
Blocks (Seattle)FAM83C-AS1
Human Protein AtlasENSG00000235214
Protein Interaction databases
FunCoupENSG00000235214
BioGRIDFAM83C-AS1
STRING (EMBL)FAM83C-AS1
ZODIACFAM83C-AS1
Ontologies - Pathways
Huge Navigator FAM83C-AS1 [HugePedia]
snp3D : Map Gene to Disease140846
BioCentury BCIQFAM83C-AS1
ClinGenFAM83C-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD140846
Chemical/Pharm GKB GenePA164723723
Clinical trialFAM83C-AS1
Miscellaneous
canSAR (ICR)FAM83C-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM83C-AS1
EVEXFAM83C-AS1
GoPubMedFAM83C-AS1
iHOPFAM83C-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:08:12 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.