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FAM83G (family with sequence similarity 83 member G)

Identity

Alias_namesfamily with sequence similarity 83, member G
Alias_symbol (synonym)FLJ41564
PAWS1
Other alias
HGNC (Hugo) FAM83G
LocusID (NCBI) 644815
Atlas_Id 63255
Location 17p11.2  [Link to chromosome band 17p11]
Location_base_pair Starts at 18971068 and ends at 19004747 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FAM83G (17p11.2) / GRAP (17p11.2)FAM83G (17p11.2) / TTC19 (17p12)FAM83G TTC19
FAM83G GRAP

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM83G   32554
Cards
Entrez_Gene (NCBI)FAM83G  644815  family with sequence similarity 83 member G
AliasesPAWS1
GeneCards (Weizmann)FAM83G
Ensembl hg19 (Hinxton)ENSG00000188522 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188522 [Gene_View]  chr17:18971068-19004747 [Contig_View]  FAM83G [Vega]
ICGC DataPortalENSG00000188522
TCGA cBioPortalFAM83G
AceView (NCBI)FAM83G
Genatlas (Paris)FAM83G
WikiGenes644815
SOURCE (Princeton)FAM83G
Genetics Home Reference (NIH)FAM83G
Genomic and cartography
GoldenPath hg38 (UCSC)FAM83G  -     chr17:18971068-19004747 -  17p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM83G  -     17p11.2   [Description]    (hg19-Feb_2009)
EnsemblFAM83G - 17p11.2 [CytoView hg19]  FAM83G - 17p11.2 [CytoView hg38]
Mapping of homologs : NCBIFAM83G [Mapview hg19]  FAM83G [Mapview hg38]
OMIM615886   
Gene and transcription
Genbank (Entrez)AK123558 BC105988 BX365956 BX402942 CF138357
RefSeq transcript (Entrez)NM_001039999
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM83G
Cluster EST : UnigeneHs.710727 [ NCBI ]
CGAP (NCI)Hs.710727
Alternative Splicing GalleryENSG00000188522
Gene ExpressionFAM83G [ NCBI-GEO ]   FAM83G [ EBI - ARRAY_EXPRESS ]   FAM83G [ SEEK ]   FAM83G [ MEM ]
Gene Expression Viewer (FireBrowse)FAM83G [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)644815
GTEX Portal (Tissue expression)FAM83G
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6ND36   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6ND36  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6ND36
Splice isoforms : SwissVarA6ND36
PhosPhoSitePlusA6ND36
Domains : Interpro (EBI)DUF1669   
Domain families : Pfam (Sanger)DUF1669 (PF07894)   
Domain families : Pfam (NCBI)pfam07894   
Conserved Domain (NCBI)FAM83G
DMDM Disease mutations644815
Blocks (Seattle)FAM83G
SuperfamilyA6ND36
Human Protein AtlasENSG00000188522
Peptide AtlasA6ND36
IPIIPI00419166   IPI00854824   IPI00793090   
Protein Interaction databases
DIP (DOE-UCLA)A6ND36
IntAct (EBI)A6ND36
FunCoupENSG00000188522
BioGRIDFAM83G
STRING (EMBL)FAM83G
ZODIACFAM83G
Ontologies - Pathways
QuickGOA6ND36
Ontology : AmiGOprotein binding  nucleus  cytosol  BMP signaling pathway  
Ontology : EGO-EBIprotein binding  nucleus  cytosol  BMP signaling pathway  
NDEx NetworkFAM83G
Atlas of Cancer Signalling NetworkFAM83G
Wikipedia pathwaysFAM83G
Orthology - Evolution
OrthoDB644815
GeneTree (enSembl)ENSG00000188522
Phylogenetic Trees/Animal Genes : TreeFamFAM83G
HOVERGENA6ND36
HOGENOMA6ND36
Homologs : HomoloGeneFAM83G
Homology/Alignments : Family Browser (UCSC)FAM83G
Gene fusions - Rearrangements
Fusion: TCGAFAM83G TTC19
Fusion: TCGAFAM83G GRAP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM83G [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM83G
dbVarFAM83G
ClinVarFAM83G
1000_GenomesFAM83G 
Exome Variant ServerFAM83G
ExAC (Exome Aggregation Consortium)FAM83G (select the gene name)
Genetic variants : HAPMAP644815
Genomic Variants (DGV)FAM83G [DGVbeta]
DECIPHERFAM83G [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM83G 
Mutations
ICGC Data PortalFAM83G 
TCGA Data PortalFAM83G 
Broad Tumor PortalFAM83G
OASIS PortalFAM83G [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM83G  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM83G
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM83G
DgiDB (Drug Gene Interaction Database)FAM83G
DoCM (Curated mutations)FAM83G (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM83G (select a term)
intoGenFAM83G
Cancer3DFAM83G(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615886   
Orphanet
MedgenFAM83G
Genetic Testing Registry FAM83G
NextProtA6ND36 [Medical]
TSGene644815
GENETestsFAM83G
Target ValidationFAM83G
Huge Navigator FAM83G [HugePedia]
snp3D : Map Gene to Disease644815
BioCentury BCIQFAM83G
ClinGenFAM83G
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644815
Chemical/Pharm GKB GenePA144596433
Clinical trialFAM83G
Miscellaneous
canSAR (ICR)FAM83G (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM83G
EVEXFAM83G
GoPubMedFAM83G
iHOPFAM83G
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:08:13 CEST 2017

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