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FAM86B2 (family with sequence similarity 86 member B2)

Identity

Alias_namesfamily with sequence similarity 86, member B2
Other alias-
HGNC (Hugo) FAM86B2
LocusID (NCBI) 653333
Atlas_Id 63259
Location 8p23.1  [Link to chromosome band 8p23]
Location_base_pair Starts at 12425615 and ends at 12436343 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM86B2   32222
Cards
Entrez_Gene (NCBI)FAM86B2  653333  family with sequence similarity 86 member B2
Aliases
GeneCards (Weizmann)FAM86B2
Ensembl hg19 (Hinxton)ENSG00000145002 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000145002 [Gene_View]  chr8:12425615-12436343 [Contig_View]  FAM86B2 [Vega]
ICGC DataPortalENSG00000145002
TCGA cBioPortalFAM86B2
AceView (NCBI)FAM86B2
Genatlas (Paris)FAM86B2
WikiGenes653333
SOURCE (Princeton)FAM86B2
Genetics Home Reference (NIH)FAM86B2
Genomic and cartography
GoldenPath hg38 (UCSC)FAM86B2  -     chr8:12425615-12436343 -  8p23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM86B2  -     8p23.1   [Description]    (hg19-Feb_2009)
EnsemblFAM86B2 - 8p23.1 [CytoView hg19]  FAM86B2 - 8p23.1 [CytoView hg38]
Mapping of homologs : NCBIFAM86B2 [Mapview hg19]  FAM86B2 [Mapview hg38]
OMIM616123   
Gene and transcription
Genbank (Entrez)AK291001 AK297741 AK298940 AK309984
RefSeq transcript (Entrez)NM_001137610
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM86B2
Cluster EST : UnigeneHs.458413 [ NCBI ]
CGAP (NCI)Hs.458413
Alternative Splicing GalleryENSG00000145002
Gene ExpressionFAM86B2 [ NCBI-GEO ]   FAM86B2 [ EBI - ARRAY_EXPRESS ]   FAM86B2 [ SEEK ]   FAM86B2 [ MEM ]
Gene Expression Viewer (FireBrowse)FAM86B2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)653333
GTEX Portal (Tissue expression)FAM86B2
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0C5J1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0C5J1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0C5J1
Splice isoforms : SwissVarP0C5J1
PhosPhoSitePlusP0C5J1
Domains : Interpro (EBI)FAM86    Methyltransf_16    SAM-dependent_MTases   
Domain families : Pfam (Sanger)FAM86 (PF14904)    Methyltransf_16 (PF10294)   
Domain families : Pfam (NCBI)pfam14904    pfam10294   
Conserved Domain (NCBI)FAM86B2
DMDM Disease mutations653333
Blocks (Seattle)FAM86B2
SuperfamilyP0C5J1
Human Protein AtlasENSG00000145002
Peptide AtlasP0C5J1
IPIIPI00332362   IPI00909977   
Protein Interaction databases
DIP (DOE-UCLA)P0C5J1
IntAct (EBI)P0C5J1
FunCoupENSG00000145002
BioGRIDFAM86B2
STRING (EMBL)FAM86B2
ZODIACFAM86B2
Ontologies - Pathways
QuickGOP0C5J1
Ontology : AmiGOmethyltransferase activity  methylation  
Ontology : EGO-EBImethyltransferase activity  methylation  
NDEx NetworkFAM86B2
Atlas of Cancer Signalling NetworkFAM86B2
Wikipedia pathwaysFAM86B2
Orthology - Evolution
OrthoDB653333
GeneTree (enSembl)ENSG00000145002
Phylogenetic Trees/Animal Genes : TreeFamFAM86B2
HOVERGENP0C5J1
HOGENOMP0C5J1
Homologs : HomoloGeneFAM86B2
Homology/Alignments : Family Browser (UCSC)FAM86B2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM86B2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM86B2
dbVarFAM86B2
ClinVarFAM86B2
1000_GenomesFAM86B2 
Exome Variant ServerFAM86B2
ExAC (Exome Aggregation Consortium)FAM86B2 (select the gene name)
Genetic variants : HAPMAP653333
Genomic Variants (DGV)FAM86B2 [DGVbeta]
DECIPHERFAM86B2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM86B2 
Mutations
ICGC Data PortalFAM86B2 
TCGA Data PortalFAM86B2 
Broad Tumor PortalFAM86B2
OASIS PortalFAM86B2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM86B2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM86B2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM86B2
DgiDB (Drug Gene Interaction Database)FAM86B2
DoCM (Curated mutations)FAM86B2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM86B2 (select a term)
intoGenFAM86B2
Cancer3DFAM86B2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616123   
Orphanet
MedgenFAM86B2
Genetic Testing Registry FAM86B2
NextProtP0C5J1 [Medical]
TSGene653333
GENETestsFAM86B2
Target ValidationFAM86B2
Huge Navigator FAM86B2 [HugePedia]
snp3D : Map Gene to Disease653333
BioCentury BCIQFAM86B2
ClinGenFAM86B2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653333
Chemical/Pharm GKB GenePA142671860
Clinical trialFAM86B2
Miscellaneous
canSAR (ICR)FAM86B2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM86B2
EVEXFAM86B2
GoPubMedFAM86B2
iHOPFAM86B2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:48:48 CEST 2017

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