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FAM90A27P (family with sequence similarity 90 member A27, pseudogene)

Identity

Alias_namesfamily with sequence similarity 90, member A27, pseudogene
Other alias-
HGNC (Hugo) FAM90A27P
LocusID (NCBI) 646508
Atlas_Id 78198
Location 19q13.42  [Link to chromosome band 19q13]

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM90A27P   43617
Cards
Entrez_Gene (NCBI)FAM90A27P  646508  family with sequence similarity 90 member A27, pseudogene
Aliases
GeneCards (Weizmann)FAM90A27P
Ensembl hg19 (Hinxton)ENSG00000189348 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000189348 [Gene_View]  - [Contig_View]  FAM90A27P [Vega]
ICGC DataPortalENSG00000189348
TCGA cBioPortalFAM90A27P
AceView (NCBI)FAM90A27P
Genatlas (Paris)FAM90A27P
WikiGenes646508
SOURCE (Princeton)FAM90A27P
Genetics Home Reference (NIH)FAM90A27P
Genomic and cartography
GoldenPath hg38 (UCSC)FAM90A27P  -  
GoldenPath hg19 (UCSC)FAM90A27P  -  
EnsemblFAM90A27P - [CytoView hg19]  FAM90A27P - [CytoView hg38]
Mapping of homologs : NCBIFAM90A27P [Mapview hg19]  FAM90A27P [Mapview hg38]
Gene and transcription
Genbank (Entrez)DN930351
RefSeq transcript (Entrez)NM_001195187
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM90A27P
Cluster EST : UnigeneHs.574588 [ NCBI ]
CGAP (NCI)Hs.574588
Alternative Splicing GalleryENSG00000189348
Gene ExpressionFAM90A27P [ NCBI-GEO ]   FAM90A27P [ EBI - ARRAY_EXPRESS ]   FAM90A27P [ SEEK ]   FAM90A27P [ MEM ]
Gene Expression Viewer (FireBrowse)FAM90A27P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)646508
GTEX Portal (Tissue expression)FAM90A27P
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NNH2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NNH2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NNH2
Splice isoforms : SwissVarA6NNH2
PhosPhoSitePlusA6NNH2
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM90A27P
DMDM Disease mutations646508
Blocks (Seattle)FAM90A27P
SuperfamilyA6NNH2
Human Protein AtlasENSG00000189348
Peptide AtlasA6NNH2
IPIIPI00871753   
Protein Interaction databases
DIP (DOE-UCLA)A6NNH2
IntAct (EBI)A6NNH2
FunCoupENSG00000189348
BioGRIDFAM90A27P
STRING (EMBL)FAM90A27P
ZODIACFAM90A27P
Ontologies - Pathways
QuickGOA6NNH2
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM90A27P
Atlas of Cancer Signalling NetworkFAM90A27P
Wikipedia pathwaysFAM90A27P
Orthology - Evolution
OrthoDB646508
GeneTree (enSembl)ENSG00000189348
Phylogenetic Trees/Animal Genes : TreeFamFAM90A27P
HOVERGENA6NNH2
HOGENOMA6NNH2
Homologs : HomoloGeneFAM90A27P
Homology/Alignments : Family Browser (UCSC)FAM90A27P
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM90A27P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM90A27P
dbVarFAM90A27P
ClinVarFAM90A27P
1000_GenomesFAM90A27P 
Exome Variant ServerFAM90A27P
ExAC (Exome Aggregation Consortium)FAM90A27P (select the gene name)
Genetic variants : HAPMAP646508
Genomic Variants (DGV)FAM90A27P [DGVbeta]
DECIPHERFAM90A27P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM90A27P 
Mutations
ICGC Data PortalFAM90A27P 
TCGA Data PortalFAM90A27P 
Broad Tumor PortalFAM90A27P
OASIS PortalFAM90A27P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM90A27P
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM90A27P
DgiDB (Drug Gene Interaction Database)FAM90A27P
DoCM (Curated mutations)FAM90A27P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM90A27P (select a term)
intoGenFAM90A27P
Cancer3DFAM90A27P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM90A27P
Genetic Testing Registry FAM90A27P
NextProtA6NNH2 [Medical]
TSGene646508
GENETestsFAM90A27P
Target ValidationFAM90A27P
Huge Navigator FAM90A27P [HugePedia]
snp3D : Map Gene to Disease646508
BioCentury BCIQFAM90A27P
ClinGenFAM90A27P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646508
Clinical trialFAM90A27P
Miscellaneous
canSAR (ICR)FAM90A27P (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM90A27P
EVEXFAM90A27P
GoPubMedFAM90A27P
iHOPFAM90A27P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:08:16 CEST 2017

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