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FAM90A2P (family with sequence similarity 90 member A2, pseudogene)

Identity

Alias_namesfamily with sequence similarity 90, member A2, pseudogene
Other alias-
HGNC (Hugo) FAM90A2P
LocusID (NCBI) 729689
Atlas_Id 63274
Location 8p23.1  [Link to chromosome band 8p23]
Location_base_pair Starts at 12173454 and ends at 12177267 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM90A2P   32250
Cards
Entrez_Gene (NCBI)FAM90A2P  729689  family with sequence similarity 90 member A2, pseudogene
Aliases
GeneCards (Weizmann)FAM90A2P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:12173454-12177267 [Contig_View]  FAM90A2P [Vega]
TCGA cBioPortalFAM90A2P
AceView (NCBI)FAM90A2P
Genatlas (Paris)FAM90A2P
WikiGenes729689
SOURCE (Princeton)FAM90A2P
Genetics Home Reference (NIH)FAM90A2P
Genomic and cartography
GoldenPath hg38 (UCSC)FAM90A2P  -     chr8:12173454-12177267 -  8p23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM90A2P  -     8p23.1   [Description]    (hg19-Feb_2009)
EnsemblFAM90A2P - 8p23.1 [CytoView hg19]  FAM90A2P - 8p23.1 [CytoView hg38]
Mapping of homologs : NCBIFAM90A2P [Mapview hg19]  FAM90A2P [Mapview hg38]
Gene and transcription
Genbank (Entrez)CX762572
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM90A2P
Cluster EST : UnigeneHs.741074 [ NCBI ]
CGAP (NCI)Hs.741074
Gene ExpressionFAM90A2P [ NCBI-GEO ]   FAM90A2P [ EBI - ARRAY_EXPRESS ]   FAM90A2P [ SEEK ]   FAM90A2P [ MEM ]
Gene Expression Viewer (FireBrowse)FAM90A2P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)729689
GTEX Portal (Tissue expression)FAM90A2P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ658T7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ658T7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ658T7
Splice isoforms : SwissVarQ658T7
PhosPhoSitePlusQ658T7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FAM90A2P
DMDM Disease mutations729689
Blocks (Seattle)FAM90A2P
SuperfamilyQ658T7
Peptide AtlasQ658T7
Protein Interaction databases
DIP (DOE-UCLA)Q658T7
IntAct (EBI)Q658T7
BioGRIDFAM90A2P
STRING (EMBL)FAM90A2P
ZODIACFAM90A2P
Ontologies - Pathways
QuickGOQ658T7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM90A2P
Atlas of Cancer Signalling NetworkFAM90A2P
Wikipedia pathwaysFAM90A2P
Orthology - Evolution
OrthoDB729689
Phylogenetic Trees/Animal Genes : TreeFamFAM90A2P
HOVERGENQ658T7
HOGENOMQ658T7
Homologs : HomoloGeneFAM90A2P
Homology/Alignments : Family Browser (UCSC)FAM90A2P
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM90A2P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM90A2P
dbVarFAM90A2P
ClinVarFAM90A2P
1000_GenomesFAM90A2P 
Exome Variant ServerFAM90A2P
ExAC (Exome Aggregation Consortium)FAM90A2P (select the gene name)
Genetic variants : HAPMAP729689
Genomic Variants (DGV)FAM90A2P [DGVbeta]
DECIPHERFAM90A2P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM90A2P 
Mutations
ICGC Data PortalFAM90A2P 
TCGA Data PortalFAM90A2P 
Broad Tumor PortalFAM90A2P
OASIS PortalFAM90A2P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAM90A2P
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM90A2P
DgiDB (Drug Gene Interaction Database)FAM90A2P
DoCM (Curated mutations)FAM90A2P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM90A2P (select a term)
intoGenFAM90A2P
Cancer3DFAM90A2P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM90A2P
Genetic Testing Registry FAM90A2P
NextProtQ658T7 [Medical]
TSGene729689
GENETestsFAM90A2P
Target ValidationFAM90A2P
Huge Navigator FAM90A2P [HugePedia]
snp3D : Map Gene to Disease729689
BioCentury BCIQFAM90A2P
ClinGenFAM90A2P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729689
Chemical/Pharm GKB GenePA142671797
Clinical trialFAM90A2P
Miscellaneous
canSAR (ICR)FAM90A2P (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM90A2P
EVEXFAM90A2P
GoPubMedFAM90A2P
iHOPFAM90A2P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:48:52 CEST 2017

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