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FAM91A1 (family with sequence similarity 91 member A1)

Identity

Alias_namesfamily with sequence similarity 91, member A1
Alias_symbol (synonym)FLJ23790
Other alias-
HGNC (Hugo) FAM91A1
LocusID (NCBI) 157769
Atlas_Id 63276
Location 8q24.13  [Link to chromosome band 8q24]
Location_base_pair Starts at 123768439 and ends at 123815450 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM91A1   26306
Cards
Entrez_Gene (NCBI)FAM91A1  157769  family with sequence similarity 91 member A1
Aliases
GeneCards (Weizmann)FAM91A1
Ensembl hg19 (Hinxton)ENSG00000176853 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176853 [Gene_View]  chr8:123768439-123815450 [Contig_View]  FAM91A1 [Vega]
ICGC DataPortalENSG00000176853
TCGA cBioPortalFAM91A1
AceView (NCBI)FAM91A1
Genatlas (Paris)FAM91A1
WikiGenes157769
SOURCE (Princeton)FAM91A1
Genetics Home Reference (NIH)FAM91A1
Genomic and cartography
GoldenPath hg38 (UCSC)FAM91A1  -     chr8:123768439-123815450 +  8q24.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAM91A1  -     8q24.13   [Description]    (hg19-Feb_2009)
EnsemblFAM91A1 - 8q24.13 [CytoView hg19]  FAM91A1 - 8q24.13 [CytoView hg38]
Mapping of homologs : NCBIFAM91A1 [Mapview hg19]  FAM91A1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK074370 AK300603 AL832830 AL832999 BC030520
RefSeq transcript (Entrez)NM_001317917 NM_001317918 NM_144963
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAM91A1
Cluster EST : UnigeneHs.459174 [ NCBI ]
CGAP (NCI)Hs.459174
Alternative Splicing GalleryENSG00000176853
Gene ExpressionFAM91A1 [ NCBI-GEO ]   FAM91A1 [ EBI - ARRAY_EXPRESS ]   FAM91A1 [ SEEK ]   FAM91A1 [ MEM ]
Gene Expression Viewer (FireBrowse)FAM91A1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)157769
GTEX Portal (Tissue expression)FAM91A1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ658Y4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ658Y4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ658Y4
Splice isoforms : SwissVarQ658Y4
PhosPhoSitePlusQ658Y4
Domains : Interpro (EBI)FAM91_C_dom    FAM91_N_dom   
Domain families : Pfam (Sanger)FAM91_C (PF14648)    FAM91_N (PF14647)   
Domain families : Pfam (NCBI)pfam14648    pfam14647   
Conserved Domain (NCBI)FAM91A1
DMDM Disease mutations157769
Blocks (Seattle)FAM91A1
SuperfamilyQ658Y4
Human Protein AtlasENSG00000176853
Peptide AtlasQ658Y4
HPRD08676
IPIIPI00152671   IPI00401840   IPI00978801   IPI00982025   IPI00982659   IPI00979106   
Protein Interaction databases
DIP (DOE-UCLA)Q658Y4
IntAct (EBI)Q658Y4
FunCoupENSG00000176853
BioGRIDFAM91A1
STRING (EMBL)FAM91A1
ZODIACFAM91A1
Ontologies - Pathways
QuickGOQ658Y4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM91A1
Atlas of Cancer Signalling NetworkFAM91A1
Wikipedia pathwaysFAM91A1
Orthology - Evolution
OrthoDB157769
GeneTree (enSembl)ENSG00000176853
Phylogenetic Trees/Animal Genes : TreeFamFAM91A1
HOVERGENQ658Y4
HOGENOMQ658Y4
Homologs : HomoloGeneFAM91A1
Homology/Alignments : Family Browser (UCSC)FAM91A1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM91A1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM91A1
dbVarFAM91A1
ClinVarFAM91A1
1000_GenomesFAM91A1 
Exome Variant ServerFAM91A1
ExAC (Exome Aggregation Consortium)FAM91A1 (select the gene name)
Genetic variants : HAPMAP157769
Genomic Variants (DGV)FAM91A1 [DGVbeta]
DECIPHERFAM91A1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAM91A1 
Mutations
ICGC Data PortalFAM91A1 
TCGA Data PortalFAM91A1 
Broad Tumor PortalFAM91A1
OASIS PortalFAM91A1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM91A1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM91A1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM91A1
DgiDB (Drug Gene Interaction Database)FAM91A1
DoCM (Curated mutations)FAM91A1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM91A1 (select a term)
intoGenFAM91A1
Cancer3DFAM91A1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM91A1
Genetic Testing Registry FAM91A1
NextProtQ658Y4 [Medical]
TSGene157769
GENETestsFAM91A1
Target ValidationFAM91A1
Huge Navigator FAM91A1 [HugePedia]
snp3D : Map Gene to Disease157769
BioCentury BCIQFAM91A1
ClinGenFAM91A1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD157769
Chemical/Pharm GKB GenePA142671820
Clinical trialFAM91A1
Miscellaneous
canSAR (ICR)FAM91A1 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM91A1
EVEXFAM91A1
GoPubMedFAM91A1
iHOPFAM91A1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:48:52 CEST 2017

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