Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

FAM92B (family with sequence similarity 92, member B)

Identity

Alias_namesfamily with sequence similarity 92, member B
Alias_symbol (synonym)FLJ44299
Other alias-
HGNC (Hugo) FAM92B
LocusID (NCBI) 339145
Atlas_Id 63278
Location 16q24.1  [Link to chromosome band 16q24]
Location_base_pair Starts at 85131958 and ends at 85146114 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FAM92B   24781
Cards
Entrez_Gene (NCBI)FAM92B  339145  family with sequence similarity 92, member B
Aliases
GeneCards (Weizmann)FAM92B
Ensembl hg19 (Hinxton)ENSG00000153789 [Gene_View]  chr16:85131958-85146114 [Contig_View]  FAM92B [Vega]
Ensembl hg38 (Hinxton)ENSG00000153789 [Gene_View]  chr16:85131958-85146114 [Contig_View]  FAM92B [Vega]
ICGC DataPortalENSG00000153789
TCGA cBioPortalFAM92B
AceView (NCBI)FAM92B
Genatlas (Paris)FAM92B
WikiGenes339145
SOURCE (Princeton)FAM92B
Genetics Home Reference (NIH)FAM92B
Genomic and cartography
GoldenPath hg19 (UCSC)FAM92B  -     chr16:85131958-85146114 -  16q24.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FAM92B  -     16q24.1   [Description]    (hg38-Dec_2013)
EnsemblFAM92B - 16q24.1 [CytoView hg19]  FAM92B - 16q24.1 [CytoView hg38]
Mapping of homologs : NCBIFAM92B [Mapview hg19]  FAM92B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126284 BC093665 BC111944 BU680724
RefSeq transcript (Entrez)NM_198491
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)FAM92B
Cluster EST : UnigeneHs.125713 [ NCBI ]
CGAP (NCI)Hs.125713
Alternative Splicing GalleryENSG00000153789
Gene ExpressionFAM92B [ NCBI-GEO ]   FAM92B [ EBI - ARRAY_EXPRESS ]   FAM92B [ SEEK ]   FAM92B [ MEM ]
Gene Expression Viewer (FireBrowse)FAM92B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)339145
GTEX Portal (Tissue expression)FAM92B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZTR7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZTR7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZTR7
Splice isoforms : SwissVarQ6ZTR7
PhosPhoSitePlusQ6ZTR7
Domains : Interpro (EBI)AH/BAR-dom    FAM92   
Domain families : Pfam (Sanger)FAM92 (PF06730)   
Domain families : Pfam (NCBI)pfam06730   
Conserved Domain (NCBI)FAM92B
DMDM Disease mutations339145
Blocks (Seattle)FAM92B
SuperfamilyQ6ZTR7
Human Protein AtlasENSG00000153789
Peptide AtlasQ6ZTR7
HPRD13488
IPIIPI00394830   IPI01014220   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZTR7
IntAct (EBI)Q6ZTR7
FunCoupENSG00000153789
BioGRIDFAM92B
STRING (EMBL)FAM92B
ZODIACFAM92B
Ontologies - Pathways
QuickGOQ6ZTR7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFAM92B
Atlas of Cancer Signalling NetworkFAM92B
Wikipedia pathwaysFAM92B
Orthology - Evolution
OrthoDB339145
GeneTree (enSembl)ENSG00000153789
Phylogenetic Trees/Animal Genes : TreeFamFAM92B
HOVERGENQ6ZTR7
HOGENOMQ6ZTR7
Homologs : HomoloGeneFAM92B
Homology/Alignments : Family Browser (UCSC)FAM92B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAM92B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAM92B
dbVarFAM92B
ClinVarFAM92B
1000_GenomesFAM92B 
Exome Variant ServerFAM92B
ExAC (Exome Aggregation Consortium)FAM92B (select the gene name)
Genetic variants : HAPMAP339145
Genomic Variants (DGV)FAM92B [DGVbeta]
DECIPHER (Syndromes)16:85131958-85146114  ENSG00000153789
CONAN: Copy Number AnalysisFAM92B 
Mutations
ICGC Data PortalFAM92B 
TCGA Data PortalFAM92B 
Broad Tumor PortalFAM92B
OASIS PortalFAM92B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFAM92B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFAM92B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FAM92B
DgiDB (Drug Gene Interaction Database)FAM92B
DoCM (Curated mutations)FAM92B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAM92B (select a term)
intoGenFAM92B
Cancer3DFAM92B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFAM92B
Genetic Testing Registry FAM92B
NextProtQ6ZTR7 [Medical]
TSGene339145
GENETestsFAM92B
Huge Navigator FAM92B [HugePedia]
snp3D : Map Gene to Disease339145
BioCentury BCIQFAM92B
ClinGenFAM92B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339145
Chemical/Pharm GKB GenePA142671826
Clinical trialFAM92B
Miscellaneous
canSAR (ICR)FAM92B (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAM92B
EVEXFAM92B
GoPubMedFAM92B
iHOPFAM92B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:04:27 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.