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FANCB (Fanconi anemia, complementation group B)

Identity

Other namesFA2
FAAP90
FAAP95
FAB
FACB
HGNC (Hugo) FANCB
LocusID (NCBI) 2187
Location Xp22.2
Location_base_pair Starts at 14861529 and ends at 14891184 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)FANCB   3583
Cards
Entrez_Gene (NCBI)FANCB  2187  Fanconi anemia, complementation group B
GeneCards (Weizmann)FANCB
Ensembl (Hinxton)ENSG00000181544 [Gene_View]  chrX:14861529-14891184 [Contig_View]  FANCB [Vega]
AceView (NCBI)FANCB
Genatlas (Paris)FANCB
WikiGenes2187
SOURCE (Princeton)NM_001018113 NM_152633
Genomic and cartography
GoldenPath (UCSC)FANCB  -  Xp22.2   chrX:14861529-14891184 -  Xp22.2   [Description]    (hg19-Feb_2009)
EnsemblFANCB - Xp22.2 [CytoView]
Mapping of homologs : NCBIFANCB [Mapview]
OMIM227650   300514   300515   314390   
Gene and transcription
Genbank (Entrez)AK091383 BC043596 BC055411 BC136558 BC136560
RefSeq transcript (Entrez)NM_001018113 NM_152633
RefSeq genomic (Entrez)AC_000155 NC_000023 NC_018934 NG_007310 NT_167197 NW_001842360 NW_004929438
Consensus coding sequences : CCDS (NCBI)FANCB
Cluster EST : UnigeneHs.554740 [ NCBI ]
CGAP (NCI)Hs.554740
Alternative Splicing : Fast-db (Paris)GSHG0031982
Alternative Splicing GalleryENSG00000181544
Gene ExpressionFANCB [ NCBI-GEO ]     FANCB [ SEEK ]   FANCB [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NB91 (Uniprot)
NextProtQ8NB91  [Medical]
With graphics : InterProQ8NB91
Splice isoforms : SwissVarQ8NB91 (Swissvar)
Related proteins : CluSTrQ8NB91
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM Disease mutations2187
Blocks (Seattle)Q8NB91
Human Protein AtlasENSG00000181544
Peptide AtlasQ8NB91
HPRD06557
IPIIPI00645780   IPI00168187   
Protein Interaction databases
DIP (DOE-UCLA)Q8NB91
IntAct (EBI)Q8NB91
FunCoupENSG00000181544
BioGRIDFANCB
InParanoidQ8NB91
Interologous Interaction database Q8NB91
IntegromeDBFANCB
STRING (EMBL)FANCB
Ontologies - Pathways
Ontology : AmiGOprotein binding  nucleoplasm  DNA repair  Fanconi anaemia nuclear complex  
Ontology : EGO-EBIprotein binding  nucleoplasm  DNA repair  Fanconi anaemia nuclear complex  
Pathways : KEGGFanconi anemia pathway   
REACTOMEFANCB
Protein Interaction DatabaseFANCB
Wikipedia pathwaysFANCB
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)FANCB
SNP (GeneSNP Utah)FANCB
SNP : HGBaseFANCB
Genetic variants : HAPMAPFANCB
1000_GenomesFANCB 
ICGC programENSG00000181544 
Somatic Mutations in Cancer : COSMICFANCB 
CONAN: Copy Number AnalysisFANCB 
Mutations and Diseases : HGMDFANCB
OMIM227650    300514    300515    314390   
GENETestsFANCB
Disease Genetic AssociationFANCB
Huge Navigator FANCB [HugePedia]  FANCB [HugeCancerGEM]
Genomic VariantsFANCB  FANCB [DGVbeta]
Exome VariantFANCB
dbVarFANCB
ClinVarFANCB
snp3D : Map Gene to Disease2187
General knowledge
Homologs : HomoloGeneFANCB
Homology/Alignments : Family Browser (UCSC)FANCB
Phylogenetic Trees/Animal Genes : TreeFamFANCB
Chemical/Protein Interactions : CTD2187
Chemical/Pharm GKB GenePA27996
Clinical trialFANCB
Cancer Resource (Charite)ENSG00000181544
Other databases
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
CoreMineFANCB
iHOPFANCB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Apr 18 16:57:39 CEST 2014

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