FANCM (Fanconi anemia, complementation group M)

Identity

Other names	FAAP250
	KIAA1596
	MGC176453
HGNC	FANCM
Location	14q21.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	FANCM   23168
Entrez_Gene	FANCM  57697  Fanconi anemia, complementation group M
	Cards
GeneCards	FANCM
Ensembl	FANCM [Search_View]   ENSG00000187790 [Gene_View]
Genatlas	FANCM
GeneLynx	FANCM
eGenome	FANCM
euGene	57697
	Genomic and cartography
GoldenPath	FANCM  -  14q21.3   chr14:44674886-44739843 +  14q21.3   [Description]    (hg18-March_2006)
Ensembl	FANCM - 14q21.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	FANCM
	Gene and transcription
Genbank	AB046816 [ ENTREZ ]
Genbank	AK001672 [ ENTREZ ]
Genbank	AK093422 [ ENTREZ ]
Genbank	AL833656 [ ENTREZ ]
Genbank	BC036056 [ ENTREZ ]
RefSeq	NM_020937 [ SRS ]    NM_020937 [ ENTREZ ]
RefSeq	AC_000057 [ SRS ]    AC_000057 [ ENTREZ ]
RefSeq	AC_000146 [ SRS ]    AC_000146 [ ENTREZ ]
RefSeq	NC_000014 [ SRS ]    NC_000014 [ ENTREZ ]
RefSeq	NG_007417 [ SRS ]    NG_007417 [ ENTREZ ]
RefSeq	NT_026437 [ SRS ]    NT_026437 [ ENTREZ ]
RefSeq	NW_001838111 [ SRS ]    NW_001838111 [ ENTREZ ]
RefSeq	NW_925539 [ SRS ]    NW_925539 [ ENTREZ ]
AceView	FANCM AceView - NCBI
Unigene	Hs.509229 [ SRS ]    Hs.509229 [ NCBI ]     HS509229 [ spliceNest ]
Fast-db	184 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q8IYD8 [ SRS]    Q8IYD8 [ EXPASY ]     Q8IYD8 [ INTERPRO ]     Q8IYD8 [ UNIPROT ]
Prosite	PS00690 DEAH_ATP_HELICASE [ SRS ]    PS00690 DEAH_ATP_HELICASE [ Expasy ]
Prosite	PS51192 HELICASE_ATP_BIND_1 [ SRS ]    PS51192 HELICASE_ATP_BIND_1 [ Expasy ]
Prosite	PS51194 HELICASE_CTER [ SRS ]    PS51194 HELICASE_CTER [ Expasy ]
Interpro	IPR014001 DEAD-like_N [ SRS ]    IPR014001 DEAD-like_N [ EBI ]
Interpro	IPR001650 DNA/RNA_helicase_C [ SRS ]    IPR001650 DNA/RNA_helicase_C [ EBI ]
Interpro	IPR011545 DNA/RNA_helicase_DEAD/DEAH_N [ SRS ]    IPR011545 DNA/RNA_helicase_DEAD/DEAH_N [ EBI ]
Interpro	IPR002464 DNA/RNA_helicase_DEAH_CS [ SRS ]    IPR002464 DNA/RNA_helicase_DEAH_CS [ EBI ]
Interpro	IPR006166 DNA_repair_nuc_XPF/helicase [ SRS ]    IPR006166 DNA_repair_nuc_XPF/helicase [ EBI ]
Interpro	IPR014021 Helicase_SF1/SF2_ATP-bd [ SRS ]    IPR014021 Helicase_SF1/SF2_ATP-bd [ EBI ]
CluSTr	Q8IYD8
Pfam	PF00270 DEAD [ SRS ]    PF00270 DEAD [ Sanger ]    pfam00270 [ NCBI-CDD ]
Pfam	PF02732 ERCC4 [ SRS ]    PF02732 ERCC4 [ Sanger ]    pfam02732 [ NCBI-CDD ]
Pfam	PF00271 Helicase_C [ SRS ]    PF00271 Helicase_C [ Sanger ]    pfam00271 [ NCBI-CDD ]
Smart	SM00487 DEXDc [EMBL]
Smart	SM00490 HELICc [EMBL]
Blocks	Q8IYD8
HPRD	13876
	Protein Interaction databases
DIP	Q8IYD8
IntAct	Q8IYD8
	Polymorphism : SNP, mutations, diseases
OMIM	609644    [ map ]
GENECLINICS	609644
SNP	FANCM [dbSNP-NCBI]
SNP	NM_020937 [SNP-NCI]
SNP	FANCM [GeneSNPs - Utah]  FANCM] [HGBASE - SRS]
HAPMAP	FANCM [HAPMAP]
HGMD	FANCM
	General knowledge
Family Browser	FANCM [UCSC Family Browser]
SOURCE	NM_020937
SMD	Hs.509229
SAGE	Hs.509229
Enzyme	3.6.1.- [ Enzyme-Expasy ]   3.6.1.- [ Enzyme-SRS ]   3.6.1.- [ IntEnz-EBI ]   3.6.1.- [ BRENDA ]   3.6.1.- [ KEGG ]   3.6.1.- [ WIT ]
GO	nucleotide binding [Amigo]  nucleotide binding
GO	DNA binding [Amigo]  DNA binding
GO	nuclease activity [Amigo]  nuclease activity
GO	protein binding [Amigo]  protein binding
GO	ATP binding [Amigo]  ATP binding
GO	nucleus [Amigo]  nucleus
GO	DNA repair [Amigo]  DNA repair
GO	ATP-dependent helicase activity [Amigo]  ATP-dependent helicase activity
GO	hydrolase activity [Amigo]  hydrolase activity
PubGene	FANCM
TreeFam	FANCM
CTD	57697 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	FANCM Related clones (RZPD - Berlin)
	PubMed
PubMed	9 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:10:33 2008