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FANK1-AS1 (FANK1 antisense RNA 1)

Identity

Alias (NCBI)-
HGNC (Hugo) FANK1-AS1
HGNC Previous nameFANK1 antisense RNA 1 (non-protein coding)
LocusID (NCBI) 101410540
Atlas_Id 63293
Location 10q26.2  [Link to chromosome band 10q26]
Location_base_pair Starts at 125972188 and ends at 125973273 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)FANK1-AS1   43915
Cards
Entrez_Gene (NCBI)FANK1-AS1    FANK1 antisense RNA 1
Aliases
GeneCards (Weizmann)FANK1-AS1
Ensembl hg19 (Hinxton)ENSG00000233409 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233409 [Gene_View]  ENSG00000233409 [Sequence]  chr10:125972188-125973273 [Contig_View]  FANK1-AS1 [Vega]
ICGC DataPortalENSG00000233409
TCGA cBioPortalFANK1-AS1
AceView (NCBI)FANK1-AS1
Genatlas (Paris)FANK1-AS1
SOURCE (Princeton)FANK1-AS1
Genetics Home Reference (NIH)FANK1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)FANK1-AS1  -     chr10:125972188-125973273 -  10q26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FANK1-AS1  -     10q26.2   [Description]    (hg19-Feb_2009)
GoldenPathFANK1-AS1 - 10q26.2 [CytoView hg19]  FANK1-AS1 - 10q26.2 [CytoView hg38]
ImmunoBaseENSG00000233409
Genome Data Viewer NCBIFANK1-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AW080472
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)FANK1-AS1
Gene ExpressionFANK1-AS1 [ NCBI-GEO ]   FANK1-AS1 [ EBI - ARRAY_EXPRESS ]   FANK1-AS1 [ SEEK ]   FANK1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)FANK1-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of FANK1-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101410540
GTEX Portal (Tissue expression)FANK1-AS1
Human Protein AtlasENSG00000233409-FANK1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FANK1-AS1
Human Protein Atlas [tissue]ENSG00000233409-FANK1-AS1 [tissue]
Protein Interaction databases
BioGRIDFANK1-AS1
STRING (EMBL)FANK1-AS1
ZODIACFANK1-AS1
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXFANK1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:50:19 CEST 2021

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