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FANK1-AS1 (FANK1 antisense RNA 1)

Identity

Alias_namesFANK1 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) FANK1-AS1
LocusID (NCBI) 101410540
Atlas_Id 63293
Location 10q26.2  [Link to chromosome band 10q26]
Location_base_pair Starts at 127660757 and ends at 127661842 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FANK1-AS1   43915
Cards
Entrez_Gene (NCBI)FANK1-AS1  101410540  FANK1 antisense RNA 1
Aliases
GeneCards (Weizmann)FANK1-AS1
Ensembl hg19 (Hinxton)ENSG00000233409 [Gene_View]  chr10:127660757-127661842 [Contig_View]  FANK1-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000233409 [Gene_View]  chr10:127660757-127661842 [Contig_View]  FANK1-AS1 [Vega]
ICGC DataPortalENSG00000233409
TCGA cBioPortalFANK1-AS1
AceView (NCBI)FANK1-AS1
Genatlas (Paris)FANK1-AS1
WikiGenes101410540
SOURCE (Princeton)FANK1-AS1
Genetics Home Reference (NIH)FANK1-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)FANK1-AS1  -     chr10:127660757-127661842 -  10q26.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FANK1-AS1  -     10q26.2   [Description]    (hg38-Dec_2013)
EnsemblFANK1-AS1 - 10q26.2 [CytoView hg19]  FANK1-AS1 - 10q26.2 [CytoView hg38]
Mapping of homologs : NCBIFANK1-AS1 [Mapview hg19]  FANK1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW080472 HG503352
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)FANK1-AS1
Cluster EST : UnigeneHs.557889 [ NCBI ]
CGAP (NCI)Hs.557889
Alternative Splicing GalleryENSG00000233409
Gene ExpressionFANK1-AS1 [ NCBI-GEO ]   FANK1-AS1 [ EBI - ARRAY_EXPRESS ]   FANK1-AS1 [ SEEK ]   FANK1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)FANK1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101410540
GTEX Portal (Tissue expression)FANK1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FANK1-AS1
DMDM Disease mutations101410540
Blocks (Seattle)FANK1-AS1
Human Protein AtlasENSG00000233409
Protein Interaction databases
FunCoupENSG00000233409
BioGRIDFANK1-AS1
STRING (EMBL)FANK1-AS1
ZODIACFANK1-AS1
Ontologies - Pathways
Huge Navigator FANK1-AS1 [HugePedia]
snp3D : Map Gene to Disease101410540
BioCentury BCIQFANK1-AS1
ClinGenFANK1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101410540
Clinical trialFANK1-AS1
Miscellaneous
canSAR (ICR)FANK1-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineFANK1-AS1
EVEXFANK1-AS1
GoPubMedFANK1-AS1
iHOPFANK1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:04:30 CET 2017

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