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FASTKD2 (FAST kinase domains 2)

Identity

Other namesKIAA0971
HGNC (Hugo) FASTKD2
LocusID (NCBI) 22868
Location 2q33.3
Location_base_pair Starts at 207630112 and ends at 207660911 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)FASTKD2   29160
Cards
Entrez_Gene (NCBI)FASTKD2  22868  FAST kinase domains 2
GeneCards (Weizmann)FASTKD2
Ensembl (Hinxton) [Gene_View]  chr2:207630112-207660911 [Contig_View]  FASTKD2 [Vega]
cBioPortalFASTKD2
AceView (NCBI)FASTKD2
Genatlas (Paris)FASTKD2
WikiGenes22868
SOURCE (Princeton)NM_001136193 NM_001136194 NM_014929
Genomic and cartography
GoldenPath (UCSC)FASTKD2  -  2q33.3   chr2:207630112-207660911 +  2q33.3   [Description]    (hg19-Feb_2009)
EnsemblFASTKD2 - 2q33.3 [CytoView]
Mapping of homologs : NCBIFASTKD2 [Mapview]
OMIM220110   612322   
Gene and transcription
Genbank (Entrez)AB023188 AF223470 AK001315 AK001516 AK021557
RefSeq transcript (Entrez)NM_001136193 NM_001136194 NM_014929
RefSeq genomic (Entrez)AC_000134 NC_000002 NC_018913 NG_008984 NT_005403 NW_001838863 NW_004929305
Consensus coding sequences : CCDS (NCBI)FASTKD2
Cluster EST : UnigeneHs.722628 [ NCBI ]
CGAP (NCI)Hs.722628
Alternative Splicing : Fast-db (Paris)GSHG0017141
Gene ExpressionFASTKD2 [ NCBI-GEO ]     FASTKD2 [ SEEK ]   FASTKD2 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYY8 (Uniprot)
NextProtQ9NYY8  [Medical]
With graphics : InterProQ9NYY8
Splice isoforms : SwissVarQ9NYY8 (Swissvar)
Domaine pattern : Prosite (Expaxy)RAP (PS51286)   
Domains : Interpro (EBI)FAST_2 [organisation]   FAST_Leu-rich [organisation]   RAP [organisation]  
Related proteins : CluSTrQ9NYY8
Domain families : Pfam (Sanger)FAST_1 (PF06743)    FAST_2 (PF08368)    RAP (PF08373)   
Domain families : Pfam (NCBI)pfam06743    pfam08368    pfam08373   
Domain families : Smart (EMBL)RAP (SM00952)  
DMDM Disease mutations22868
Blocks (Seattle)Q9NYY8
Peptide AtlasQ9NYY8
HPRD13825
IPIIPI00013735   IPI00479951   IPI00952735   
Protein Interaction databases
DIP (DOE-UCLA)Q9NYY8
IntAct (EBI)Q9NYY8
BioGRIDFASTKD2
InParanoidQ9NYY8
Interologous Interaction database Q9NYY8
IntegromeDBFASTKD2
STRING (EMBL)FASTKD2
Ontologies - Pathways
Ontology : AmiGOprotein kinase activity  mitochondrion  protein phosphorylation  poly(A) RNA binding  cellular respiration  
Ontology : EGO-EBIprotein kinase activity  mitochondrion  protein phosphorylation  poly(A) RNA binding  cellular respiration  
Protein Interaction DatabaseFASTKD2
Wikipedia pathwaysFASTKD2
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)FASTKD2
snp3D : Map Gene to Disease22868
SNP (GeneSNP Utah)FASTKD2
SNP : HGBaseFASTKD2
Genetic variants : HAPMAPFASTKD2
Exome VariantFASTKD2
1000_GenomesFASTKD2 
Somatic Mutations in Cancer : COSMICFASTKD2 
CONAN: Copy Number AnalysisFASTKD2 
Mutations and Diseases : HGMDFASTKD2
Mutations and Diseases : intOGenFASTKD2
Genomic VariantsFASTKD2  FASTKD2 [DGVbeta]
dbVarFASTKD2
ClinVarFASTKD2
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM220110    612322   
MedgenFASTKD2
GENETestsFASTKD2
Disease Genetic AssociationFASTKD2
Huge Navigator FASTKD2 [HugePedia]  FASTKD2 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneFASTKD2
Homology/Alignments : Family Browser (UCSC)FASTKD2
Phylogenetic Trees/Animal Genes : TreeFamFASTKD2
Chemical/Protein Interactions : CTD22868
Chemical/Pharm GKB GenePA134974924
Clinical trialFASTKD2
Other databases
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
CoreMineFASTKD2
iHOPFASTKD2
OncoSearchFASTKD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 22 18:50:50 CEST 2014

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