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FASTKD2 (FAST kinase domains 2)

Identity

Other namesKIAA0971
HGNC (Hugo) FASTKD2
LocusID (NCBI) 22868
Location 2q33.3
Location_base_pair Starts at 207630112 and ends at 207660911 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)FASTKD2   29160
Cards
Entrez_Gene (NCBI)FASTKD2  22868  FAST kinase domains 2
GeneCards (Weizmann)FASTKD2
Ensembl hg19 (Hinxton) [Gene_View]  chr2:207630112-207660911 [Contig_View]  FASTKD2 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:207630112-207660911 [Contig_View]  FASTKD2 [Vega]
cBioPortalFASTKD2
AceView (NCBI)FASTKD2
Genatlas (Paris)FASTKD2
WikiGenes22868
SOURCE (Princeton)FASTKD2
Genomic and cartography
GoldenPath hg19 (UCSC)FASTKD2  -     chr2:207630112-207660911 +  2q33.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FASTKD2  -     2q33.3   [Description]    (hg38-Dec_2013)
EnsemblFASTKD2 - 2q33.3 [CytoView hg19]  FASTKD2 - 2q33.3 [CytoView hg38]
Mapping of homologs : NCBIFASTKD2 [Mapview hg19]  FASTKD2 [Mapview hg38]
OMIM220110   612322   
Gene and transcription
Genbank (Entrez)AB023188 AF223470 AK001315 AK001516 AK021557
RefSeq transcript (Entrez)NM_001136193 NM_001136194 NM_014929
RefSeq genomic (Entrez)AC_000134 NC_000002 NC_018913 NG_008984 NT_005403 NW_001838863 NW_004929305
Consensus coding sequences : CCDS (NCBI)FASTKD2
Cluster EST : UnigeneHs.722628 [ NCBI ]
CGAP (NCI)Hs.722628
Alternative Splicing : Fast-db (Paris)GSHG0017141
Gene ExpressionFASTKD2 [ NCBI-GEO ]     FASTKD2 [ SEEK ]   FASTKD2 [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NYY8 (Uniprot)
NextProtQ9NYY8  [Medical]
With graphics : InterProQ9NYY8
Splice isoforms : SwissVarQ9NYY8 (Swissvar)
Domaine pattern : Prosite (Expaxy)RAP (PS51286)   
Domains : Interpro (EBI)FAST_2    FAST_Leu-rich    RAP   
Related proteins : CluSTrQ9NYY8
Domain families : Pfam (Sanger)FAST_1 (PF06743)    FAST_2 (PF08368)    RAP (PF08373)   
Domain families : Pfam (NCBI)pfam06743    pfam08368    pfam08373   
Domain families : Smart (EMBL)RAP (SM00952)  
DMDM Disease mutations22868
Blocks (Seattle)Q9NYY8
Peptide AtlasQ9NYY8
HPRD13825
IPIIPI00013735   IPI00479951   IPI00952735   
Protein Interaction databases
DIP (DOE-UCLA)Q9NYY8
IntAct (EBI)Q9NYY8
BioGRIDFASTKD2
IntegromeDBFASTKD2
STRING (EMBL)FASTKD2
Ontologies - Pathways
QuickGOQ9NYY8
Ontology : AmiGOprotein kinase activity  mitochondrion  protein phosphorylation  poly(A) RNA binding  cellular respiration  
Ontology : EGO-EBIprotein kinase activity  mitochondrion  protein phosphorylation  poly(A) RNA binding  cellular respiration  
Protein Interaction DatabaseFASTKD2
DoCM (Curated mutations)FASTKD2
Wikipedia pathwaysFASTKD2
Gene fusion - rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerFASTKD2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FASTKD2
dbVarFASTKD2
ClinVarFASTKD2
1000_GenomesFASTKD2 
Exome Variant ServerFASTKD2
SNP (GeneSNP Utah)FASTKD2
SNP : HGBaseFASTKD2
Genetic variants : HAPMAPFASTKD2
Genomic VariantsFASTKD2  FASTKD2 [DGVbeta]
Mutations
Somatic Mutations in Cancer : COSMICFASTKD2 
CONAN: Copy Number AnalysisFASTKD2 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)2:207630112-207660911
Mutations and Diseases : HGMDFASTKD2
OMIM220110    612322   
MedgenFASTKD2
NextProtQ9NYY8 [Medical]
GENETestsFASTKD2
Disease Genetic AssociationFASTKD2
Huge Navigator FASTKD2 [HugePedia]  FASTKD2 [HugeCancerGEM]
snp3D : Map Gene to Disease22868
DGIdb (Drug Gene Interaction db)FASTKD2
General knowledge
Homologs : HomoloGeneFASTKD2
Homology/Alignments : Family Browser (UCSC)FASTKD2
Phylogenetic Trees/Animal Genes : TreeFamFASTKD2
Chemical/Protein Interactions : CTD22868
Chemical/Pharm GKB GenePA134974924
Clinical trialFASTKD2
Other databases
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
CoreMineFASTKD2
GoPubMedFASTKD2
iHOPFASTKD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2014Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 20 21:32:13 CET 2014

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