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FATE1 (fetal and adult testis expressed 1)

Identity

Alias_symbol (synonym)FATE
CT43
Other alias
HGNC (Hugo) FATE1
LocusID (NCBI) 89885
Atlas_Id 55770
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 151716036 and ends at 151723192 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FATE1 (Xq28) / TMEM131 (2q11.2)MTMR1 (Xq28) / FATE1 (Xq28)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FATE1   24683
Cards
Entrez_Gene (NCBI)FATE1  89885  fetal and adult testis expressed 1
AliasesCT43; FATE
GeneCards (Weizmann)FATE1
Ensembl hg19 (Hinxton)ENSG00000147378 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000147378 [Gene_View]  ENSG00000147378 [Sequence]  chrX:151716036-151723192 [Contig_View]  FATE1 [Vega]
ICGC DataPortalENSG00000147378
TCGA cBioPortalFATE1
AceView (NCBI)FATE1
Genatlas (Paris)FATE1
WikiGenes89885
SOURCE (Princeton)FATE1
Genetics Home Reference (NIH)FATE1
Genomic and cartography
GoldenPath hg38 (UCSC)FATE1  -     chrX:151716036-151723192 +  Xq28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FATE1  -     Xq28   [Description]    (hg19-Feb_2009)
EnsemblFATE1 - Xq28 [CytoView hg19]  FATE1 - Xq28 [CytoView hg38]
Mapping of homologs : NCBIFATE1 [Mapview hg19]  FATE1 [Mapview hg38]
OMIM300450   
Gene and transcription
Genbank (Entrez)AF249872 AY101182 BC022064
RefSeq transcript (Entrez)NM_033085
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FATE1
Cluster EST : UnigeneHs.301960 [ NCBI ]
CGAP (NCI)Hs.301960
Alternative Splicing GalleryENSG00000147378
Gene ExpressionFATE1 [ NCBI-GEO ]   FATE1 [ EBI - ARRAY_EXPRESS ]   FATE1 [ SEEK ]   FATE1 [ MEM ]
Gene Expression Viewer (FireBrowse)FATE1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)89885
GTEX Portal (Tissue expression)FATE1
Human Protein AtlasENSG00000147378-FATE1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ969F0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ969F0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ969F0
Splice isoforms : SwissVarQ969F0
PhosPhoSitePlusQ969F0
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FATE1
DMDM Disease mutations89885
Blocks (Seatt