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FAXC (failed axon connections homolog)

Identity

Alias_namesC6orf168
chromosome 6 open reading frame 168
failed axon connections homolog (Drosophila)
Alias_symbol (synonym)MGC2817
dJ273F20
Other alias
HGNC (Hugo) FAXC
LocusID (NCBI) 84553
Atlas_Id 63306
Location 6q16.2  [Link to chromosome band 6q16]
Location_base_pair Starts at 99271161 and ends at 99350310 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FAXC (6q16.2) / ASCC3 (6q16.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(6;6)(q16;q16) FAXC/ASCC3


External links

Nomenclature
HGNC (Hugo)FAXC   20742
Cards
Entrez_Gene (NCBI)FAXC  84553  failed axon connections homolog
AliasesC6orf168; dJ273F20
GeneCards (Weizmann)FAXC
Ensembl hg19 (Hinxton)ENSG00000146267 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000146267 [Gene_View]  ENSG00000146267 [Sequence]  chr6:99271161-99350310 [Contig_View]  FAXC [Vega]
ICGC DataPortalENSG00000146267
TCGA cBioPortalFAXC
AceView (NCBI)FAXC
Genatlas (Paris)FAXC
WikiGenes84553
SOURCE (Princeton)FAXC
Genetics Home Reference (NIH)FAXC
Genomic and cartography
GoldenPath hg38 (UCSC)FAXC  -     chr6:99271161-99350310 -  6q16.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FAXC  -     6q16.2   [Description]    (hg19-Feb_2009)
EnsemblFAXC - 6q16.2 [CytoView hg19]  FAXC - 6q16.2 [CytoView hg38]
Mapping of homologs : NCBIFAXC [Mapview hg19]  FAXC [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055101 AK057793 AK096480 BC004869 BC006515
RefSeq transcript (Entrez)NM_001346530 NM_001346531 NM_001346532 NM_001346533 NM_032511
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FAXC
Cluster EST : UnigeneHs.573245 [ NCBI ]
CGAP (NCI)Hs.573245
Alternative Splicing GalleryENSG00000146267
Gene ExpressionFAXC [ NCBI-GEO ]   FAXC [ EBI - ARRAY_EXPRESS ]   FAXC [ SEEK ]   FAXC [ MEM ]
Gene Expression Viewer (FireBrowse)FAXC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84553
GTEX Portal (Tissue expression)FAXC
Human Protein AtlasENSG00000146267-FAXC [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5TGI0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5TGI0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5TGI0
Splice isoforms : SwissVarQ5TGI0
PhosPhoSitePlusQ5TGI0
Domains : Interpro (EBI)FAX    Glutathione-S-Trfase_C-like    Metaxin_GST    Thioredoxin-like_fold   
Domain families : Pfam (Sanger)GST_C_6 (PF17171)    GST_N_4 (PF17172)   
Domain families : Pfam (NCBI)pfam17171    pfam17172   
Conserved Domain (NCBI)FAXC
DMDM Disease mutations84553
Blocks (Seattle)FAXC
SuperfamilyQ5TGI0
Human Protein Atlas [tissue]ENSG00000146267-FAXC [tissue]
Peptide AtlasQ5TGI0
HPRD12866
IPIIPI00396439   IPI01011602   
Protein Interaction databases
DIP (DOE-UCLA)Q5TGI0
IntAct (EBI)Q5TGI0
FunCoupENSG00000146267
BioGRIDFAXC
STRING (EMBL)FAXC
ZODIACFAXC
Ontologies - Pathways
QuickGOQ5TGI0
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkFAXC
Atlas of Cancer Signalling NetworkFAXC
Wikipedia pathwaysFAXC
Orthology - Evolution
OrthoDB84553
GeneTree (enSembl)ENSG00000146267
Phylogenetic Trees/Animal Genes : TreeFamFAXC
HOVERGENQ5TGI0
HOGENOMQ5TGI0
Homologs : HomoloGeneFAXC
Homology/Alignments : Family Browser (UCSC)FAXC
Gene fusions - Rearrangements
Fusion : QuiverFAXC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFAXC [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FAXC
dbVarFAXC
ClinVarFAXC
1000_GenomesFAXC 
Exome Variant ServerFAXC
ExAC (Exome Aggregation Consortium)ENSG00000146267
GNOMAD BrowserENSG00000146267
Varsome BrowserFAXC
Genetic variants : HAPMAP84553
Genomic Variants (DGV)FAXC [DGVbeta]
DECIPHERFAXC [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFAXC 
Mutations
ICGC Data PortalFAXC 
TCGA Data PortalFAXC 
Broad Tumor PortalFAXC
OASIS PortalFAXC [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFAXC
BioMutasearch FAXC
DgiDB (Drug Gene Interaction Database)FAXC
DoCM (Curated mutations)FAXC (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FAXC (select a term)
intoGenFAXC
Cancer3DFAXC(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETFAXC
MedgenFAXC
Genetic Testing Registry FAXC
NextProtQ5TGI0 [Medical]
TSGene84553
GENETestsFAXC
Target ValidationFAXC
Huge Navigator FAXC [HugePedia]
snp3D : Map Gene to Disease84553
BioCentury BCIQFAXC
ClinGenFAXC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84553
Chemical/Pharm GKB GenePA134918761
Clinical trialFAXC
Miscellaneous
canSAR (ICR)FAXC (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFAXC
EVEXFAXC
GoPubMedFAXC
iHOPFAXC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Jul 30 13:45:45 CEST 2018

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