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FBF1 (Fas binding factor 1)

Identity

Alias_namesFas (TNFRSF6) binding factor 1
Alias_symbol (synonym)FLJ00103
FBF-1
KIAA1863
ALB
Other aliasAlb
HGNC (Hugo) FBF1
LocusID (NCBI) 85302
Atlas_Id 43255
Location 17q25.1  [Link to chromosome band 17q25]
Location_base_pair Starts at 75909574 and ends at 75938232 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FBF1 (17q25.1) / HELZ (17q24.2)FBF1 17q25.1 / HELZ 17q24.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FBF1   24674
Cards
Entrez_Gene (NCBI)FBF1  85302  Fas binding factor 1
AliasesAlb; FBF-1
GeneCards (Weizmann)FBF1
Ensembl hg19 (Hinxton)ENSG00000188878 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188878 [Gene_View]  chr17:75909574-75938232 [Contig_View]  FBF1 [Vega]
ICGC DataPortalENSG00000188878
TCGA cBioPortalFBF1
AceView (NCBI)FBF1
Genatlas (Paris)FBF1
WikiGenes85302
SOURCE (Princeton)FBF1
Genetics Home Reference (NIH)FBF1
Genomic and cartography
GoldenPath hg38 (UCSC)FBF1  -     chr17:75909574-75938232 -  17q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FBF1  -     17q25.1   [Description]    (hg19-Feb_2009)
EnsemblFBF1 - 17q25.1 [CytoView hg19]  FBF1 - 17q25.1 [CytoView hg38]
Mapping of homologs : NCBIFBF1 [Mapview hg19]  FBF1 [Mapview hg38]
OMIM616807   
Gene and transcription
Genbank (Entrez)AB354594 AK057261 AK074045 BC007570 BC012332
RefSeq transcript (Entrez)NM_001080542 NM_001319193
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FBF1
Cluster EST : UnigeneHs.720068 [ NCBI ]
CGAP (NCI)Hs.720068
Alternative Splicing GalleryENSG00000188878
Gene ExpressionFBF1 [ NCBI-GEO ]   FBF1 [ EBI - ARRAY_EXPRESS ]   FBF1 [ SEEK ]   FBF1 [ MEM ]
Gene Expression Viewer (FireBrowse)FBF1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85302
GTEX Portal (Tissue expression)FBF1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TES7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TES7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TES7
Splice isoforms : SwissVarQ8TES7
PhosPhoSitePlusQ8TES7
Domains : Interpro (EBI)FBF1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FBF1
DMDM Disease mutations85302
Blocks (Seattle)FBF1
SuperfamilyQ8TES7
Human Protein AtlasENSG00000188878
Peptide AtlasQ8TES7
IPIIPI00953519   IPI00478832   IPI00855860   IPI01008723   IPI00788810   IPI01014686   
Protein Interaction databases
DIP (DOE-UCLA)Q8TES7
IntAct (EBI)Q8TES7
FunCoupENSG00000188878
BioGRIDFBF1
STRING (EMBL)FBF1
ZODIACFBF1
Ontologies - Pathways
QuickGOQ8TES7
Ontology : AmiGOspindle pole  protein binding  centriole  cytosol  apical junction complex  apical junction assembly  keratin filament  cilium assembly  establishment of epithelial cell polarity  ciliary transition fiber  ciliary basal body docking  
Ontology : EGO-EBIspindle pole  protein binding  centriole  cytosol  apical junction complex  apical junction assembly  keratin filament  cilium assembly  establishment of epithelial cell polarity  ciliary transition fiber  ciliary basal body docking  
NDEx NetworkFBF1
Atlas of Cancer Signalling NetworkFBF1
Wikipedia pathwaysFBF1
Orthology - Evolution
OrthoDB85302
GeneTree (enSembl)ENSG00000188878
Phylogenetic Trees/Animal Genes : TreeFamFBF1
HOVERGENQ8TES7
HOGENOMQ8TES7
Homologs : HomoloGeneFBF1
Homology/Alignments : Family Browser (UCSC)FBF1
Gene fusions - Rearrangements
Fusion : MitelmanFBF1/HELZ [17q25.1/17q24.2]  
Fusion: TCGAFBF1 17q25.1 HELZ 17q24.2 LUAD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFBF1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FBF1
dbVarFBF1
ClinVarFBF1
1000_GenomesFBF1 
Exome Variant ServerFBF1
ExAC (Exome Aggregation Consortium)FBF1 (select the gene name)
Genetic variants : HAPMAP85302
Genomic Variants (DGV)FBF1 [DGVbeta]
DECIPHERFBF1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFBF1 
Mutations
ICGC Data PortalFBF1 
TCGA Data PortalFBF1 
Broad Tumor PortalFBF1
OASIS PortalFBF1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFBF1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFBF1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FBF1
DgiDB (Drug Gene Interaction Database)FBF1
DoCM (Curated mutations)FBF1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FBF1 (select a term)
intoGenFBF1
Cancer3DFBF1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616807   
Orphanet
MedgenFBF1
Genetic Testing Registry FBF1
NextProtQ8TES7 [Medical]
TSGene85302
GENETestsFBF1
Target ValidationFBF1
Huge Navigator FBF1 [HugePedia]
snp3D : Map Gene to Disease85302
BioCentury BCIQFBF1
ClinGenFBF1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD85302
Chemical/Pharm GKB GenePA134941499
Clinical trialFBF1
Miscellaneous
canSAR (ICR)FBF1 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFBF1
EVEXFBF1
GoPubMedFBF1
iHOPFBF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:33:30 CEST 2017

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