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FBF1 (Fas binding factor 1)

Identity

Alias (NCBI)Alb
FBF-1
HGNC (Hugo) FBF1
HGNC Alias symbFLJ00103
FBF-1
KIAA1863
ALB
HGNC Alias namealbatross
HGNC Previous nameFas (TNFRSF6) binding factor 1
LocusID (NCBI) 85302
Atlas_Id 43255
Location 17q25.1  [Link to chromosome band 17q25]
Location_base_pair Starts at 75909574 and ends at 75938232 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FBF1 (17q25.1) / HELZ (17q24.2)FBF1 17q25.1 / HELZ 17q24.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)FBF1   24674
Cards
Entrez_Gene (NCBI)FBF1    Fas binding factor 1
AliasesAlb; FBF-1
GeneCards (Weizmann)FBF1
Ensembl hg19 (Hinxton)ENSG00000188878 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188878 [Gene_View]  ENSG00000188878 [Sequence]  chr17:75909574-75938232 [Contig_View]  FBF1 [Vega]
ICGC DataPortalENSG00000188878
TCGA cBioPortalFBF1
AceView (NCBI)FBF1
Genatlas (Paris)FBF1
SOURCE (Princeton)FBF1
Genetics Home Reference (NIH)FBF1
Genomic and cartography
GoldenPath hg38 (UCSC)FBF1  -     chr17:75909574-75938232 -  17q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FBF1  -     17q25.1   [Description]    (hg19-Feb_2009)
GoldenPathFBF1 - 17q25.1 [CytoView hg19]  FBF1 - 17q25.1 [CytoView hg38]
ImmunoBaseENSG00000188878
Genome Data Viewer NCBIFBF1 [Mapview hg19]  
OMIM616807   
Gene and transcription
Genbank (Entrez)AB354594 AK057261 AK074045 BC007570 BC012332
RefSeq transcript (Entrez)NM_001080542 NM_001319193
Consensus coding sequences : CCDS (NCBI)FBF1
Gene ExpressionFBF1 [ NCBI-GEO ]   FBF1 [ EBI - ARRAY_EXPRESS ]   FBF1 [ SEEK ]   FBF1 [ MEM ]
Gene Expression Viewer (FireBrowse)FBF1 [ Firebrowse - Broad ]
GenevisibleExpression of FBF1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85302
GTEX Portal (Tissue expression)FBF1
Human Protein AtlasENSG00000188878-FBF1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TES7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TES7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TES7
PhosPhoSitePlusQ8TES7
Domains : Interpro (EBI)FBF1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FBF1
SuperfamilyQ8TES7
AlphaFold pdb e-kbQ8TES7   
Human Protein Atlas [tissue]ENSG00000188878-FBF1 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q8TES7
IntAct (EBI)Q8TES7
BioGRIDFBF1
STRING (EMBL)FBF1
ZODIACFBF1
Ontologies - Pathways
QuickGOQ8TES7
Ontology : AmiGOspindle pole  protein binding  centrosome  centriole  centriole  cytosol  ciliary basal body  apical junction complex  apical junction assembly  keratin filament  cilium assembly  cilium assembly  cilium assembly  establishment of epithelial cell polarity  ciliary transition fiber  ciliary basal body-plasma membrane docking  
Ontology : EGO-EBIspindle pole  protein binding  centrosome  centriole  centriole  cytosol  ciliary basal body  apical junction complex  apical junction assembly  keratin filament  cilium assembly  cilium assembly  cilium assembly  establishment of epithelial cell polarity  ciliary transition fiber  ciliary basal body-plasma membrane docking  
NDEx NetworkFBF1
Atlas of Cancer Signalling NetworkFBF1
Wikipedia pathwaysFBF1
Orthology - Evolution
OrthoDB85302
GeneTree (enSembl)ENSG00000188878
Phylogenetic Trees/Animal Genes : TreeFamFBF1
Homologs : HomoloGeneFBF1
Homology/Alignments : Family Browser (UCSC)FBF1
Gene fusions - Rearrangements
Fusion : MitelmanFBF1/HELZ [17q25.1/17q24.2]  
Fusion : QuiverFBF1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFBF1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FBF1
dbVarFBF1
ClinVarFBF1
MonarchFBF1
1000_GenomesFBF1 
Exome Variant ServerFBF1
GNOMAD BrowserENSG00000188878
Varsome BrowserFBF1
ACMGFBF1 variants
VarityQ8TES7
Genomic Variants (DGV)FBF1 [DGVbeta]
DECIPHERFBF1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFBF1 
Mutations
ICGC Data PortalFBF1 
TCGA Data PortalFBF1 
Broad Tumor PortalFBF1
OASIS PortalFBF1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFBF1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DFBF1
Mutations and Diseases : HGMDFBF1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaFBF1
DgiDB (Drug Gene Interaction Database)FBF1
DoCM (Curated mutations)FBF1
CIViC (Clinical Interpretations of Variants in Cancer)FBF1
Cancer3DFBF1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616807   
Orphanet
DisGeNETFBF1
MedgenFBF1
Genetic Testing Registry FBF1
NextProtQ8TES7 [Medical]
GENETestsFBF1
Target ValidationFBF1
Huge Navigator FBF1 [HugePedia]
ClinGenFBF1
Clinical trials, drugs, therapy
MyCancerGenomeFBF1
Protein Interactions : CTDFBF1
Pharm GKB GenePA134941499
PharosQ8TES7
Clinical trialFBF1
Miscellaneous
canSAR (ICR)FBF1
HarmonizomeFBF1
DataMed IndexFBF1
Probes
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFBF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:09:02 CEST 2021

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