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FBLL1 (fibrillarin-like 1)

Identity

Alias_symbol (synonym)LOC345630
Other alias-
HGNC (Hugo) FBLL1
LocusID (NCBI) 345630
Atlas_Id 63308
Location 5q34  [Link to chromosome band 5q34]
Location_base_pair Starts at 168529577 and ends at 168530634 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FBLL1   35458
Cards
Entrez_Gene (NCBI)FBLL1  345630  fibrillarin-like 1
Aliases
GeneCards (Weizmann)FBLL1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:168529577-168530634 [Contig_View]  FBLL1 [Vega]
TCGA cBioPortalFBLL1
AceView (NCBI)FBLL1
Genatlas (Paris)FBLL1
WikiGenes345630
SOURCE (Princeton)FBLL1
Genetics Home Reference (NIH)FBLL1
Genomic and cartography
GoldenPath hg38 (UCSC)FBLL1  -     chr5:168529577-168530634 +  5q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FBLL1  -     5q34   [Description]    (hg19-Feb_2009)
EnsemblFBLL1 - 5q34 [CytoView hg19]  FBLL1 - 5q34 [CytoView hg38]
Mapping of homologs : NCBIFBLL1 [Mapview hg19]  FBLL1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX115749 CK906195 DB496895
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FBLL1
Cluster EST : UnigeneHs.166262 [ NCBI ]
CGAP (NCI)Hs.166262
Gene ExpressionFBLL1 [ NCBI-GEO ]   FBLL1 [ EBI - ARRAY_EXPRESS ]   FBLL1 [ SEEK ]   FBLL1 [ MEM ]
Gene Expression Viewer (FireBrowse)FBLL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)345630
GTEX Portal (Tissue expression)FBLL1
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NHQ2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NHQ2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NHQ2
Splice isoforms : SwissVarA6NHQ2
Catalytic activity : Enzyme2.1.1.- [ Enzyme-Expasy ]   2.1.1.-2.1.1.- [ IntEnz-EBI ]   2.1.1.- [ BRENDA ]   2.1.1.- [ KEGG ]   
PhosPhoSitePlusA6NHQ2
Domaine pattern : Prosite (Expaxy)FIBRILLARIN (PS00566)   
Domains : Interpro (EBI)Fibrillarin    Fibrillarin_CS    SAM-dependent_MTases   
Domain families : Pfam (Sanger)Fibrillarin (PF01269)   
Domain families : Pfam (NCBI)pfam01269   
Domain families : Smart (EMBL)Fibrillarin (SM01206)  
Conserved Domain (NCBI)FBLL1
DMDM Disease mutations345630
Blocks (Seattle)FBLL1
SuperfamilyA6NHQ2
Peptide AtlasA6NHQ2
IPIIPI00235647   
Protein Interaction databases
DIP (DOE-UCLA)A6NHQ2
IntAct (EBI)A6NHQ2
BioGRIDFBLL1
STRING (EMBL)FBLL1
ZODIACFBLL1
Ontologies - Pathways
QuickGOA6NHQ2
Ontology : AmiGObox C/D snoRNA 3'-end processing  fibrillar center  RNA binding  nucleus  tRNA processing  rRNA methyltransferase activity  Cajal body  rRNA methylation  box C/D snoRNP complex  small-subunit processome  histone glutamine methylation  histone-glutamine methyltransferase activity  
Ontology : EGO-EBIbox C/D snoRNA 3'-end processing  fibrillar center  RNA binding  nucleus  tRNA processing  rRNA methyltransferase activity  Cajal body  rRNA methylation  box C/D snoRNP complex  small-subunit processome  histone glutamine methylation  histone-glutamine methyltransferase activity  
NDEx NetworkFBLL1
Atlas of Cancer Signalling NetworkFBLL1
Wikipedia pathwaysFBLL1
Orthology - Evolution
OrthoDB345630
Phylogenetic Trees/Animal Genes : TreeFamFBLL1
HOVERGENA6NHQ2
HOGENOMA6NHQ2
Homologs : HomoloGeneFBLL1
Homology/Alignments : Family Browser (UCSC)FBLL1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFBLL1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FBLL1
dbVarFBLL1
ClinVarFBLL1
1000_GenomesFBLL1 
Exome Variant ServerFBLL1
ExAC (Exome Aggregation Consortium)FBLL1 (select the gene name)
Genetic variants : HAPMAP345630
Genomic Variants (DGV)FBLL1 [DGVbeta]
DECIPHERFBLL1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFBLL1 
Mutations
ICGC Data PortalFBLL1 
TCGA Data PortalFBLL1 
Broad Tumor PortalFBLL1
OASIS PortalFBLL1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFBLL1
BioMutasearch FBLL1
DgiDB (Drug Gene Interaction Database)FBLL1
DoCM (Curated mutations)FBLL1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FBLL1 (select a term)
intoGenFBLL1
Cancer3DFBLL1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFBLL1
Genetic Testing Registry FBLL1
NextProtA6NHQ2 [Medical]
TSGene345630
GENETestsFBLL1
Target ValidationFBLL1
Huge Navigator FBLL1 [HugePedia]
snp3D : Map Gene to Disease345630
BioCentury BCIQFBLL1
ClinGenFBLL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD345630
Clinical trialFBLL1
Miscellaneous
canSAR (ICR)FBLL1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFBLL1
EVEXFBLL1
GoPubMedFBLL1
iHOPFBLL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:08:20 CEST 2017

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