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FBRS (fibrosin)

Identity

Alias_namesFBS1
fibrosin 1
Alias_symbol (synonym)FBS
FLJ11618
Other alias
HGNC (Hugo) FBRS
LocusID (NCBI) 64319
Atlas_Id 55982
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 30659519 and ends at 30670810 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FBRS (16p11.2) / C5orf56 ()FBRS (16p11.2) / CLCN7 (16p13.3)FBRS (16p11.2) / FBRS (16p11.2)
FBRS (16p11.2) / KLK3 (19q13.33)FBRS (16p11.2) / SOBP (6q21)ZNF286B (17p11.2) / FBRS (16p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FBRS   20442
Cards
Entrez_Gene (NCBI)FBRS  64319  fibrosin
AliasesFBS; FBS1
GeneCards (Weizmann)FBRS
Ensembl hg19 (Hinxton)ENSG00000156860 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000156860 [Gene_View]  chr16:30659519-30670810 [Contig_View]  FBRS [Vega]
ICGC DataPortalENSG00000156860
TCGA cBioPortalFBRS
AceView (NCBI)FBRS
Genatlas (Paris)FBRS
WikiGenes64319
SOURCE (Princeton)FBRS
Genetics Home Reference (NIH)FBRS
Genomic and cartography
GoldenPath hg38 (UCSC)FBRS  -     chr16:30659519-30670810 +  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FBRS  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblFBRS - 16p11.2 [CytoView hg19]  FBRS - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBIFBRS [Mapview hg19]  FBRS [Mapview hg38]
OMIM608601   
Gene and transcription
Genbank (Entrez)AA431800 AJ712524 AK021680 AK022551 AK093045
RefSeq transcript (Entrez)NM_001105079 NM_022452
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FBRS
Cluster EST : UnigeneHs.728926 [ NCBI ]
CGAP (NCI)Hs.728926
Alternative Splicing GalleryENSG00000156860
Gene ExpressionFBRS [ NCBI-GEO ]   FBRS [ EBI - ARRAY_EXPRESS ]   FBRS [ SEEK ]   FBRS [ MEM ]
Gene Expression Viewer (FireBrowse)FBRS [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64319
GTEX Portal (Tissue expression)FBRS
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HAH7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HAH7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HAH7
Splice isoforms : SwissVarQ9HAH7
PhosPhoSitePlusQ9HAH7
Domains : Interpro (EBI)AUTS2   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FBRS
DMDM Disease mutations64319
Blocks (Seattle)FBRS
SuperfamilyQ9HAH7
Human Protein AtlasENSG00000156860
Peptide AtlasQ9HAH7
HPRD16354
IPIIPI00068355   IPI01018266   IPI00790251   
Protein Interaction databases
DIP (DOE-UCLA)Q9HAH7
IntAct (EBI)Q9HAH7
FunCoupENSG00000156860
BioGRIDFBRS
STRING (EMBL)FBRS
ZODIACFBRS
Ontologies - Pathways
QuickGOQ9HAH7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFBRS
Atlas of Cancer Signalling NetworkFBRS
Wikipedia pathwaysFBRS
Orthology - Evolution
OrthoDB64319
GeneTree (enSembl)ENSG00000156860
Phylogenetic Trees/Animal Genes : TreeFamFBRS
HOVERGENQ9HAH7
HOGENOMQ9HAH7
Homologs : HomoloGeneFBRS
Homology/Alignments : Family Browser (UCSC)FBRS
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFBRS [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FBRS
dbVarFBRS
ClinVarFBRS
1000_GenomesFBRS 
Exome Variant ServerFBRS
ExAC (Exome Aggregation Consortium)FBRS (select the gene name)
Genetic variants : HAPMAP64319
Genomic Variants (DGV)FBRS [DGVbeta]
DECIPHERFBRS [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFBRS 
Mutations
ICGC Data PortalFBRS 
TCGA Data PortalFBRS 
Broad Tumor PortalFBRS
OASIS PortalFBRS [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFBRS  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFBRS
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FBRS
DgiDB (Drug Gene Interaction Database)FBRS
DoCM (Curated mutations)FBRS (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FBRS (select a term)
intoGenFBRS
Cancer3DFBRS(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608601   
Orphanet
MedgenFBRS
Genetic Testing Registry FBRS
NextProtQ9HAH7 [Medical]
TSGene64319
GENETestsFBRS
Huge Navigator FBRS [HugePedia]
snp3D : Map Gene to Disease64319
BioCentury BCIQFBRS
ClinGenFBRS
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64319
Chemical/Pharm GKB GenePA162388128
Clinical trialFBRS
Miscellaneous
canSAR (ICR)FBRS (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFBRS
EVEXFBRS
GoPubMedFBRS
iHOPFBRS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:15:36 CEST 2017

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