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FBXL13 (F-box and leucine-rich repeat protein 13)

Identity

Alias_symbol (synonym)MGC21636
Fbl13
DRC6
Other alias
HGNC (Hugo) FBXL13
LocusID (NCBI) 222235
Atlas_Id 63312
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 102453308 and ends at 102715288 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
FBXL13 (7q22.1) / TERF2IP (16q23.1)HAUS4 (14q11.2) / FBXL13 (7q22.1)XAB2 (19p13.2) / FBXL13 (7q22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FBXL13   21658
Cards
Entrez_Gene (NCBI)FBXL13  222235  F-box and leucine-rich repeat protein 13
AliasesFbl13
GeneCards (Weizmann)FBXL13
Ensembl hg19 (Hinxton)ENSG00000161040 [Gene_View]  chr7:102453308-102715288 [Contig_View]  FBXL13 [Vega]
Ensembl hg38 (Hinxton)ENSG00000161040 [Gene_View]  chr7:102453308-102715288 [Contig_View]  FBXL13 [Vega]
ICGC DataPortalENSG00000161040
TCGA cBioPortalFBXL13
AceView (NCBI)FBXL13
Genatlas (Paris)FBXL13
WikiGenes222235
SOURCE (Princeton)FBXL13
Genetics Home Reference (NIH)FBXL13
Genomic and cartography
GoldenPath hg19 (UCSC)FBXL13  -     chr7:102453308-102715288 -  7q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FBXL13  -     7q22.1   [Description]    (hg38-Dec_2013)
EnsemblFBXL13 - 7q22.1 [CytoView hg19]  FBXL13 - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBIFBXL13 [Mapview hg19]  FBXL13 [Mapview hg38]
OMIM609080   
Gene and transcription
Genbank (Entrez)AK095387 AK097537 AL713709 AY359238 AY359239
RefSeq transcript (Entrez)NM_001111038 NM_001287150 NM_145032
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)FBXL13
Cluster EST : UnigeneHs.660029 [ NCBI ]
CGAP (NCI)Hs.660029
Alternative Splicing GalleryENSG00000161040
Gene ExpressionFBXL13 [ NCBI-GEO ]   FBXL13 [ EBI - ARRAY_EXPRESS ]   FBXL13 [ SEEK ]   FBXL13 [ MEM ]
Gene Expression Viewer (FireBrowse)FBXL13 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)222235
GTEX Portal (Tissue expression)FBXL13
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NEE6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NEE6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NEE6
Splice isoforms : SwissVarQ8NEE6
PhosPhoSitePlusQ8NEE6
Domaine pattern : Prosite (Expaxy)FBOX (PS50181)   
Domains : Interpro (EBI)F-box_dom    Leu-rich_rpt_Cys-con_subtyp   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)LRR_CC (SM00367)  
Conserved Domain (NCBI)FBXL13
DMDM Disease mutations222235
Blocks (Seattle)FBXL13
SuperfamilyQ8NEE6
Human Protein AtlasENSG00000161040
Peptide AtlasQ8NEE6
HPRD12364
IPIIPI00171183   IPI00554446   IPI00554466   IPI00554608   IPI00554533   IPI00927671   IPI00641532   
Protein Interaction databases
DIP (DOE-UCLA)Q8NEE6
IntAct (EBI)Q8NEE6
FunCoupENSG00000161040
BioGRIDFBXL13
STRING (EMBL)FBXL13
ZODIACFBXL13
Ontologies - Pathways
QuickGOQ8NEE6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFBXL13
Atlas of Cancer Signalling NetworkFBXL13
Wikipedia pathwaysFBXL13
Orthology - Evolution
OrthoDB222235
GeneTree (enSembl)ENSG00000161040
Phylogenetic Trees/Animal Genes : TreeFamFBXL13
HOVERGENQ8NEE6
HOGENOMQ8NEE6
Homologs : HomoloGeneFBXL13
Homology/Alignments : Family Browser (UCSC)FBXL13
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFBXL13 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FBXL13
dbVarFBXL13
ClinVarFBXL13
1000_GenomesFBXL13 
Exome Variant ServerFBXL13
ExAC (Exome Aggregation Consortium)FBXL13 (select the gene name)
Genetic variants : HAPMAP222235
Genomic Variants (DGV)FBXL13 [DGVbeta]
DECIPHER (Syndromes)7:102453308-102715288  ENSG00000161040
CONAN: Copy Number AnalysisFBXL13 
Mutations
ICGC Data PortalFBXL13 
TCGA Data PortalFBXL13 
Broad Tumor PortalFBXL13
OASIS PortalFBXL13 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFBXL13  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFBXL13
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FBXL13
DgiDB (Drug Gene Interaction Database)FBXL13
DoCM (Curated mutations)FBXL13 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FBXL13 (select a term)
intoGenFBXL13
Cancer3DFBXL13(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609080   
Orphanet
MedgenFBXL13
Genetic Testing Registry FBXL13
NextProtQ8NEE6 [Medical]
TSGene222235
GENETestsFBXL13
Huge Navigator FBXL13 [HugePedia]
snp3D : Map Gene to Disease222235
BioCentury BCIQFBXL13
ClinGenFBXL13
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD222235
Chemical/Pharm GKB GenePA134938720
Clinical trialFBXL13
Miscellaneous
canSAR (ICR)FBXL13 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFBXL13
EVEXFBXL13
GoPubMedFBXL13
iHOPFBXL13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:04:34 CET 2017

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