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FBXL19-AS1 (FBXL19 antisense RNA 1 (head to head))

Identity

Alias_namesNCRNA00095
non-protein coding RNA 95
FBXL19 antisense RNA 1 (non-protein coding)
FBXL19 antisense RNA 1
Alias_symbol (synonym)MGC125469
MGC125470
MGC125472
Other alias
HGNC (Hugo) FBXL19-AS1
LocusID (NCBI) 283932
Atlas_Id 63316
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 30919319 and ends at 30922183 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FBXL19-AS1   27557
Cards
Entrez_Gene (NCBI)FBXL19-AS1  283932  FBXL19 antisense RNA 1 (head to head)
AliasesNCRNA00095
GeneCards (Weizmann)FBXL19-AS1
Ensembl hg19 (Hinxton)ENSG00000260852 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260852 [Gene_View]  chr16:30919319-30922183 [Contig_View]  FBXL19-AS1 [Vega]
ICGC DataPortalENSG00000260852
TCGA cBioPortalFBXL19-AS1
AceView (NCBI)FBXL19-AS1
Genatlas (Paris)FBXL19-AS1
WikiGenes283932
SOURCE (Princeton)FBXL19-AS1
Genetics Home Reference (NIH)FBXL19-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)FBXL19-AS1  -     chr16:30919319-30922183 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FBXL19-AS1  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblFBXL19-AS1 - 16p11.2 [CytoView hg19]  FBXL19-AS1 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBIFBXL19-AS1 [Mapview hg19]  FBXL19-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090544 AK092263 BC101464 BC101988 BC105687
RefSeq transcript (Entrez)NM_175901
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FBXL19-AS1
Cluster EST : UnigeneHs.711535 [ NCBI ]
CGAP (NCI)Hs.711535
Alternative Splicing GalleryENSG00000260852
Gene ExpressionFBXL19-AS1 [ NCBI-GEO ]   FBXL19-AS1 [ EBI - ARRAY_EXPRESS ]   FBXL19-AS1 [ SEEK ]   FBXL19-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)FBXL19-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283932
GTEX Portal (Tissue expression)FBXL19-AS1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ494R0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ494R0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ494R0
Splice isoforms : SwissVarQ494R0
PhosPhoSitePlusQ494R0
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FBXL19-AS1
DMDM Disease mutations283932
Blocks (Seattle)FBXL19-AS1
SuperfamilyQ494R0
Human Protein AtlasENSG00000260852
Peptide AtlasQ494R0
HPRD14149
IPIIPI00168077   
Protein Interaction databases
DIP (DOE-UCLA)Q494R0
IntAct (EBI)Q494R0
FunCoupENSG00000260852
BioGRIDFBXL19-AS1
STRING (EMBL)FBXL19-AS1
ZODIACFBXL19-AS1
Ontologies - Pathways
QuickGOQ494R0
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFBXL19-AS1
Atlas of Cancer Signalling NetworkFBXL19-AS1
Wikipedia pathwaysFBXL19-AS1
Orthology - Evolution
OrthoDB283932
GeneTree (enSembl)ENSG00000260852
Phylogenetic Trees/Animal Genes : TreeFamFBXL19-AS1
HOVERGENQ494R0
HOGENOMQ494R0
Homologs : HomoloGeneFBXL19-AS1
Homology/Alignments : Family Browser (UCSC)FBXL19-AS1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFBXL19-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FBXL19-AS1
dbVarFBXL19-AS1
ClinVarFBXL19-AS1
1000_GenomesFBXL19-AS1 
Exome Variant ServerFBXL19-AS1
ExAC (Exome Aggregation Consortium)FBXL19-AS1 (select the gene name)
Genetic variants : HAPMAP283932
Genomic Variants (DGV)FBXL19-AS1 [DGVbeta]
DECIPHERFBXL19-AS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFBXL19-AS1 
Mutations
ICGC Data PortalFBXL19-AS1 
TCGA Data PortalFBXL19-AS1 
Broad Tumor PortalFBXL19-AS1
OASIS PortalFBXL19-AS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFBXL19-AS1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FBXL19-AS1
DgiDB (Drug Gene Interaction Database)FBXL19-AS1
DoCM (Curated mutations)FBXL19-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FBXL19-AS1 (select a term)
intoGenFBXL19-AS1
Cancer3DFBXL19-AS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFBXL19-AS1
Genetic Testing Registry FBXL19-AS1
NextProtQ494R0 [Medical]
TSGene283932
GENETestsFBXL19-AS1
Target ValidationFBXL19-AS1
Huge Navigator FBXL19-AS1 [HugePedia]
snp3D : Map Gene to Disease283932
BioCentury BCIQFBXL19-AS1
ClinGenFBXL19-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283932
Chemical/Pharm GKB GenePA164723637
Clinical trialFBXL19-AS1
Miscellaneous
canSAR (ICR)FBXL19-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFBXL19-AS1
EVEXFBXL19-AS1
GoPubMedFBXL19-AS1
iHOPFBXL19-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:15:18 CEST 2017

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