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FBXL22 (F-box and leucine-rich repeat protein 22)

Identity

Alias_symbol (synonym)Fbl22
FLJ39626
Other alias
HGNC (Hugo) FBXL22
LocusID (NCBI) 283807
Atlas_Id 53188
Location 15q22.31  [Link to chromosome band 15q22]
Location_base_pair Starts at 63889552 and ends at 63894620 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FBXL22   27537
Cards
Entrez_Gene (NCBI)FBXL22  283807  F-box and leucine-rich repeat protein 22
AliasesFbl22
GeneCards (Weizmann)FBXL22
Ensembl hg19 (Hinxton)ENSG00000197361 [Gene_View]  chr15:63889552-63894620 [Contig_View]  FBXL22 [Vega]
Ensembl hg38 (Hinxton)ENSG00000197361 [Gene_View]  chr15:63889552-63894620 [Contig_View]  FBXL22 [Vega]
ICGC DataPortalENSG00000197361
TCGA cBioPortalFBXL22
AceView (NCBI)FBXL22
Genatlas (Paris)FBXL22
WikiGenes283807
SOURCE (Princeton)FBXL22
Genetics Home Reference (NIH)FBXL22
Genomic and cartography
GoldenPath hg19 (UCSC)FBXL22  -     chr15:63889552-63894620 +  15q22.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FBXL22  -     15q22.31   [Description]    (hg38-Dec_2013)
EnsemblFBXL22 - 15q22.31 [CytoView hg19]  FBXL22 - 15q22.31 [CytoView hg38]
Mapping of homologs : NCBIFBXL22 [Mapview hg19]  FBXL22 [Mapview hg38]
OMIM609088   
Gene and transcription
Genbank (Entrez)AA495872 AK096945 AM392805 AM393002 AM393163
RefSeq transcript (Entrez)NM_203373
RefSeq genomic (Entrez)NC_000015 NC_018926 NG_027784 NT_010194 NW_004929398
Consensus coding sequences : CCDS (NCBI)FBXL22
Cluster EST : UnigeneHs.656997 [ NCBI ]
CGAP (NCI)Hs.656997
Alternative Splicing GalleryENSG00000197361
Gene ExpressionFBXL22 [ NCBI-GEO ]   FBXL22 [ EBI - ARRAY_EXPRESS ]   FBXL22 [ SEEK ]   FBXL22 [ MEM ]
Gene Expression Viewer (FireBrowse)FBXL22 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283807
GTEX Portal (Tissue expression)FBXL22
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6P050   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6P050  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6P050
Splice isoforms : SwissVarQ6P050
PhosPhoSitePlusQ6P050
Domains : Interpro (EBI)F-box_dom   
Domain families : Pfam (Sanger)F-box-like (PF12937)   
Domain families : Pfam (NCBI)pfam12937   
Conserved Domain (NCBI)FBXL22
DMDM Disease mutations283807
Blocks (Seattle)FBXL22
SuperfamilyQ6P050
Human Protein AtlasENSG00000197361
Peptide AtlasQ6P050
HPRD16432
IPIIPI00402258   
Protein Interaction databases
DIP (DOE-UCLA)Q6P050
IntAct (EBI)Q6P050
FunCoupENSG00000197361
BioGRIDFBXL22
STRING (EMBL)FBXL22
ZODIACFBXL22
Ontologies - Pathways
QuickGOQ6P050
Ontology : AmiGOprotein ubiquitination  SCF ubiquitin ligase complex  Z disc  proteasome-mediated ubiquitin-dependent protein catabolic process  ubiquitin protein ligase activity  
Ontology : EGO-EBIprotein ubiquitination  SCF ubiquitin ligase complex  Z disc  proteasome-mediated ubiquitin-dependent protein catabolic process  ubiquitin protein ligase activity  
NDEx NetworkFBXL22
Atlas of Cancer Signalling NetworkFBXL22
Wikipedia pathwaysFBXL22
Orthology - Evolution
OrthoDB283807
GeneTree (enSembl)ENSG00000197361
Phylogenetic Trees/Animal Genes : TreeFamFBXL22
HOVERGENQ6P050
HOGENOMQ6P050
Homologs : HomoloGeneFBXL22
Homology/Alignments : Family Browser (UCSC)FBXL22
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFBXL22 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FBXL22
dbVarFBXL22
ClinVarFBXL22
1000_GenomesFBXL22 
Exome Variant ServerFBXL22
ExAC (Exome Aggregation Consortium)FBXL22 (select the gene name)
Genetic variants : HAPMAP283807
Genomic Variants (DGV)FBXL22 [DGVbeta]
DECIPHER (Syndromes)15:63889552-63894620  ENSG00000197361
CONAN: Copy Number AnalysisFBXL22 
Mutations
ICGC Data PortalFBXL22 
TCGA Data PortalFBXL22 
Broad Tumor PortalFBXL22
OASIS PortalFBXL22 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFBXL22  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFBXL22
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FBXL22
DgiDB (Drug Gene Interaction Database)FBXL22
DoCM (Curated mutations)FBXL22 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FBXL22 (select a term)
intoGenFBXL22
Cancer3DFBXL22(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609088   
Orphanet
MedgenFBXL22
Genetic Testing Registry FBXL22
NextProtQ6P050 [Medical]
TSGene283807
GENETestsFBXL22
Huge Navigator FBXL22 [HugePedia]
snp3D : Map Gene to Disease283807
BioCentury BCIQFBXL22
ClinGenFBXL22
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283807
Chemical/Pharm GKB GenePA134959373
Clinical trialFBXL22
Miscellaneous
canSAR (ICR)FBXL22 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFBXL22
EVEXFBXL22
GoPubMedFBXL22
iHOPFBXL22
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:05:44 CET 2017

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