Atlas of Genetics and Cytogenetics in Oncology and Haematology


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FBXO24 (F-box protein 24)

Identity

Alias_namesF-box only protein 24
Alias_symbol (synonym)FBX24
Other alias
HGNC (Hugo) FBXO24
LocusID (NCBI) 26261
Atlas_Id 63328
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 100187196 and ends at 100198740 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
FBXO24 (7q22.1) / RBFOX2 (22q12.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FBXO24   13595
Cards
Entrez_Gene (NCBI)FBXO24  26261  F-box protein 24
AliasesFBX24
GeneCards (Weizmann)FBXO24
Ensembl hg19 (Hinxton)ENSG00000106336 [Gene_View]  chr7:100187196-100198740 [Contig_View]  FBXO24 [Vega]
Ensembl hg38 (Hinxton)ENSG00000106336 [Gene_View]  chr7:100187196-100198740 [Contig_View]  FBXO24 [Vega]
ICGC DataPortalENSG00000106336
TCGA cBioPortalFBXO24
AceView (NCBI)FBXO24
Genatlas (Paris)FBXO24
WikiGenes26261
SOURCE (Princeton)FBXO24
Genetics Home Reference (NIH)FBXO24
Genomic and cartography
GoldenPath hg19 (UCSC)FBXO24  -     chr7:100187196-100198740 +  7q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FBXO24  -     7q22.1   [Description]    (hg38-Dec_2013)
EnsemblFBXO24 - 7q22.1 [CytoView hg19]  FBXO24 - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBIFBXO24 [Mapview hg19]  FBXO24 [Mapview hg38]
OMIM609097   
Gene and transcription
Genbank (Entrez)AF174604 AK292240 AK301864 AK302252 AK310487
RefSeq transcript (Entrez)NM_001163499 NM_012172 NM_033506
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)FBXO24
Cluster EST : UnigeneHs.283764 [ NCBI ]
CGAP (NCI)Hs.283764
Alternative Splicing GalleryENSG00000106336
Gene ExpressionFBXO24 [ NCBI-GEO ]   FBXO24 [ EBI - ARRAY_EXPRESS ]   FBXO24 [ SEEK ]   FBXO24 [ MEM ]
Gene Expression Viewer (FireBrowse)FBXO24 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26261
GTEX Portal (Tissue expression)FBXO24
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75426   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75426  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75426
Splice isoforms : SwissVarO75426
PhosPhoSitePlusO75426
Domaine pattern : Prosite (Expaxy)FBOX (PS50181)    RCC1_3 (PS50012)   
Domains : Interpro (EBI)F-box_dom    RCC1/BLIP-II    Reg_chr_condens   
Domain families : Pfam (Sanger)F-box (PF00646)    RCC1 (PF00415)   
Domain families : Pfam (NCBI)pfam00646    pfam00415   
Domain families : Smart (EMBL)FBOX (SM00256)  
Conserved Domain (NCBI)FBXO24
DMDM Disease mutations26261
Blocks (Seattle)FBXO24
SuperfamilyO75426
Human Protein AtlasENSG00000106336
Peptide AtlasO75426
HPRD16438
IPIIPI00219503   IPI00025705   IPI00947077   IPI00943736   IPI00939223   IPI00946905   IPI00947262   
Protein Interaction databases
DIP (DOE-UCLA)O75426
IntAct (EBI)O75426
FunCoupENSG00000106336
BioGRIDFBXO24
STRING (EMBL)FBXO24
ZODIACFBXO24
Ontologies - Pathways
QuickGOO75426
Ontology : AmiGOubiquitin ligase complex  ubiquitin-protein transferase activity  protein binding  protein ubiquitination  
Ontology : EGO-EBIubiquitin ligase complex  ubiquitin-protein transferase activity  protein binding  protein ubiquitination  
NDEx NetworkFBXO24
Atlas of Cancer Signalling NetworkFBXO24
Wikipedia pathwaysFBXO24
Orthology - Evolution
OrthoDB26261
GeneTree (enSembl)ENSG00000106336
Phylogenetic Trees/Animal Genes : TreeFamFBXO24
HOVERGENO75426
HOGENOMO75426
Homologs : HomoloGeneFBXO24
Homology/Alignments : Family Browser (UCSC)FBXO24
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFBXO24 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FBXO24
dbVarFBXO24
ClinVarFBXO24
1000_GenomesFBXO24 
Exome Variant ServerFBXO24
ExAC (Exome Aggregation Consortium)FBXO24 (select the gene name)
Genetic variants : HAPMAP26261
Genomic Variants (DGV)FBXO24 [DGVbeta]
DECIPHER (Syndromes)7:100187196-100198740  ENSG00000106336
CONAN: Copy Number AnalysisFBXO24 
Mutations
ICGC Data PortalFBXO24 
TCGA Data PortalFBXO24 
Broad Tumor PortalFBXO24
OASIS PortalFBXO24 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFBXO24  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFBXO24
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FBXO24
DgiDB (Drug Gene Interaction Database)FBXO24
DoCM (Curated mutations)FBXO24 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FBXO24 (select a term)
intoGenFBXO24
Cancer3DFBXO24(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609097   
Orphanet
MedgenFBXO24
Genetic Testing Registry FBXO24
NextProtO75426 [Medical]
TSGene26261
GENETestsFBXO24
Huge Navigator FBXO24 [HugePedia]
snp3D : Map Gene to Disease26261
BioCentury BCIQFBXO24
ClinGenFBXO24
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26261
Chemical/Pharm GKB GenePA28037
Clinical trialFBXO24
Miscellaneous
canSAR (ICR)FBXO24 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFBXO24
EVEXFBXO24
GoPubMedFBXO24
iHOPFBXO24
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:04:36 CET 2017

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