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FBXO33 (F-box protein 33)

Identity

Alias_namesF-box only protein 33
Alias_symbol (synonym)Fbx33
Other aliasBMND12
c14_5247
HGNC (Hugo) FBXO33
LocusID (NCBI) 254170
Atlas_Id 63330
Location 14q21.1  [Link to chromosome band 14q21]
Location_base_pair Starts at 39396373 and ends at 39432500 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NCOR2 (12q24.31) / FBXO33 (14q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FBXO33   19833
Cards
Entrez_Gene (NCBI)FBXO33  254170  F-box protein 33
AliasesBMND12; Fbx33; c14_5247
GeneCards (Weizmann)FBXO33
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:39396373-39432500 [Contig_View]  FBXO33 [Vega]
TCGA cBioPortalFBXO33
AceView (NCBI)FBXO33
Genatlas (Paris)FBXO33
WikiGenes254170
SOURCE (Princeton)FBXO33
Genetics Home Reference (NIH)FBXO33
Genomic and cartography
GoldenPath hg38 (UCSC)FBXO33  -     chr14:39396373-39432500 -  14q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FBXO33  -     14q21.1   [Description]    (hg19-Feb_2009)
EnsemblFBXO33 - 14q21.1 [CytoView hg19]  FBXO33 - 14q21.1 [CytoView hg38]
Mapping of homologs : NCBIFBXO33 [Mapview hg19]  FBXO33 [Mapview hg38]
OMIM609103   
Gene and transcription
Genbank (Entrez)AI141232 AI989795 AK294140 BC030611 BC042535
RefSeq transcript (Entrez)NM_203301
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FBXO33
Cluster EST : UnigeneHs.146632 [ NCBI ]
CGAP (NCI)Hs.146632
Gene ExpressionFBXO33 [ NCBI-GEO ]   FBXO33 [ EBI - ARRAY_EXPRESS ]   FBXO33 [ SEEK ]   FBXO33 [ MEM ]
Gene Expression Viewer (FireBrowse)FBXO33 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)254170
GTEX Portal (Tissue expression)FBXO33
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z6M2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z6M2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z6M2
Splice isoforms : SwissVarQ7Z6M2
PhosPhoSitePlusQ7Z6M2
Domaine pattern : Prosite (Expaxy)FBOX (PS50181)   
Domains : Interpro (EBI)F-box_dom    L_dom-like   
Domain families : Pfam (Sanger)F-box-like (PF12937)   
Domain families : Pfam (NCBI)pfam12937   
Domain families : Smart (EMBL)FBOX (SM00256)  
Conserved Domain (NCBI)FBXO33
DMDM Disease mutations254170
Blocks (Seattle)FBXO33
SuperfamilyQ7Z6M2
Peptide AtlasQ7Z6M2
HPRD16441
IPIIPI00328603   IPI01025901   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z6M2
IntAct (EBI)Q7Z6M2
BioGRIDFBXO33
STRING (EMBL)FBXO33
ZODIACFBXO33
Ontologies - Pathways
QuickGOQ7Z6M2
Ontology : AmiGOprotein binding  protein ubiquitination  
Ontology : EGO-EBIprotein binding  protein ubiquitination  
NDEx NetworkFBXO33
Atlas of Cancer Signalling NetworkFBXO33
Wikipedia pathwaysFBXO33
Orthology - Evolution
OrthoDB254170
Phylogenetic Trees/Animal Genes : TreeFamFBXO33
HOVERGENQ7Z6M2
HOGENOMQ7Z6M2
Homologs : HomoloGeneFBXO33
Homology/Alignments : Family Browser (UCSC)FBXO33
Gene fusions - Rearrangements
Fusion: Tumor Portal FBXO33
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFBXO33 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FBXO33
dbVarFBXO33
ClinVarFBXO33
1000_GenomesFBXO33 
Exome Variant ServerFBXO33
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP254170
Genomic Variants (DGV)FBXO33 [DGVbeta]
DECIPHERFBXO33 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFBXO33 
Mutations
ICGC Data PortalFBXO33 
TCGA Data PortalFBXO33 
Broad Tumor PortalFBXO33
OASIS PortalFBXO33 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFBXO33  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFBXO33
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FBXO33
DgiDB (Drug Gene Interaction Database)FBXO33
DoCM (Curated mutations)FBXO33 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FBXO33 (select a term)
intoGenFBXO33
Cancer3DFBXO33(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609103   
Orphanet
MedgenFBXO33
Genetic Testing Registry FBXO33
NextProtQ7Z6M2 [Medical]
TSGene254170
GENETestsFBXO33
Target ValidationFBXO33
Huge Navigator FBXO33 [HugePedia]
snp3D : Map Gene to Disease254170
BioCentury BCIQFBXO33
ClinGenFBXO33
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD254170
Chemical/Pharm GKB GenePA134861757
Clinical trialFBXO33
Miscellaneous
canSAR (ICR)FBXO33 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFBXO33
EVEXFBXO33
GoPubMedFBXO33
iHOPFBXO33
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:47:36 CET 2017

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