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FBXO36 (F-box protein 36)

Identity

Alias_namesF-box only protein 36
Alias_symbol (synonym)Fbx36
FLJ37592
Other alias
HGNC (Hugo) FBXO36
LocusID (NCBI) 130888
Atlas_Id 63331
Location 2q36.3  [Link to chromosome band 2q36]
Location_base_pair Starts at 229922491 and ends at 230013109 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
COL4A3 (2q36.3) / FBXO36 (2q36.3)FBXO36 (2q36.3) / OSBP2 (22q12.2)LOC100507412 (-) / FBXO36 (2q36.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FBXO36   27020
Cards
Entrez_Gene (NCBI)FBXO36  130888  F-box protein 36
AliasesFbx36
GeneCards (Weizmann)FBXO36
Ensembl hg19 (Hinxton)ENSG00000153832 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000153832 [Gene_View]  chr2:229922491-230013109 [Contig_View]  FBXO36 [Vega]
ICGC DataPortalENSG00000153832
TCGA cBioPortalFBXO36
AceView (NCBI)FBXO36
Genatlas (Paris)FBXO36
WikiGenes130888
SOURCE (Princeton)FBXO36
Genetics Home Reference (NIH)FBXO36
Genomic and cartography
GoldenPath hg38 (UCSC)FBXO36  -     chr2:229922491-230013109 +  2q36.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FBXO36  -     2q36.3   [Description]    (hg19-Feb_2009)
EnsemblFBXO36 - 2q36.3 [CytoView hg19]  FBXO36 - 2q36.3 [CytoView hg38]
Mapping of homologs : NCBIFBXO36 [Mapview hg19]  FBXO36 [Mapview hg38]
OMIM609105   
Gene and transcription
Genbank (Entrez)AK094911 AK123085 AK289655 AK309702 BC017869
RefSeq transcript (Entrez)NM_174899
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FBXO36
Cluster EST : UnigeneHs.140666 [ NCBI ]
CGAP (NCI)Hs.140666
Alternative Splicing GalleryENSG00000153832
Gene ExpressionFBXO36 [ NCBI-GEO ]   FBXO36 [ EBI - ARRAY_EXPRESS ]   FBXO36 [ SEEK ]   FBXO36 [ MEM ]
Gene Expression Viewer (FireBrowse)FBXO36 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)130888
GTEX Portal (Tissue expression)FBXO36
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NEA4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NEA4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NEA4
Splice isoforms : SwissVarQ8NEA4
PhosPhoSitePlusQ8NEA4
Domaine pattern : Prosite (Expaxy)FBOX (PS50181)   
Domains : Interpro (EBI)F-box_dom   
Domain families : Pfam (Sanger)F-box (PF00646)   
Domain families : Pfam (NCBI)pfam00646   
Domain families : Smart (EMBL)FBOX (SM00256)  
Conserved Domain (NCBI)FBXO36
DMDM Disease mutations130888
Blocks (Seattle)FBXO36
SuperfamilyQ8NEA4
Human Protein AtlasENSG00000153832
Peptide AtlasQ8NEA4
HPRD16443
IPIIPI00302293   IPI00789236   IPI00917213   
Protein Interaction databases
DIP (DOE-UCLA)Q8NEA4
IntAct (EBI)Q8NEA4
FunCoupENSG00000153832
BioGRIDFBXO36
STRING (EMBL)FBXO36
ZODIACFBXO36
Ontologies - Pathways
QuickGOQ8NEA4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFBXO36
Atlas of Cancer Signalling NetworkFBXO36
Wikipedia pathwaysFBXO36
Orthology - Evolution
OrthoDB130888
GeneTree (enSembl)ENSG00000153832
Phylogenetic Trees/Animal Genes : TreeFamFBXO36
HOVERGENQ8NEA4
HOGENOMQ8NEA4
Homologs : HomoloGeneFBXO36
Homology/Alignments : Family Browser (UCSC)FBXO36
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFBXO36 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FBXO36
dbVarFBXO36
ClinVarFBXO36
1000_GenomesFBXO36 
Exome Variant ServerFBXO36
ExAC (Exome Aggregation Consortium)FBXO36 (select the gene name)
Genetic variants : HAPMAP130888
Genomic Variants (DGV)FBXO36 [DGVbeta]
DECIPHERFBXO36 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFBXO36 
Mutations
ICGC Data PortalFBXO36 
TCGA Data PortalFBXO36 
Broad Tumor PortalFBXO36
OASIS PortalFBXO36 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFBXO36  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFBXO36
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FBXO36
DgiDB (Drug Gene Interaction Database)FBXO36
DoCM (Curated mutations)FBXO36 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FBXO36 (select a term)
intoGenFBXO36
Cancer3DFBXO36(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609105   
Orphanet
MedgenFBXO36
Genetic Testing Registry FBXO36
NextProtQ8NEA4 [Medical]
TSGene130888
GENETestsFBXO36
Target ValidationFBXO36
Huge Navigator FBXO36 [HugePedia]
snp3D : Map Gene to Disease130888
BioCentury BCIQFBXO36
ClinGenFBXO36
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD130888
Chemical/Pharm GKB GenePA134918778
Clinical trialFBXO36
Miscellaneous
canSAR (ICR)FBXO36 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFBXO36
EVEXFBXO36
GoPubMedFBXO36
iHOPFBXO36
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:08:23 CEST 2017

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