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FBXO41 (F-box protein 41)

Identity

Alias_symbol (synonym)KIAA1940
Fbx41
Other aliasFBX41
HGNC (Hugo) FBXO41
LocusID (NCBI) 150726
Atlas_Id 63333
Location 2p13.2  [Link to chromosome band 2p13]
Location_base_pair Starts at 73254682 and ends at 73269630 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FBXO41 (2p13.2) / MICALL2 (7p22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FBXO41   29409
Cards
Entrez_Gene (NCBI)FBXO41  150726  F-box protein 41
AliasesFBX41
GeneCards (Weizmann)FBXO41
Ensembl hg19 (Hinxton)ENSG00000163013 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163013 [Gene_View]  chr2:73254682-73269630 [Contig_View]  FBXO41 [Vega]
ICGC DataPortalENSG00000163013
TCGA cBioPortalFBXO41
AceView (NCBI)FBXO41
Genatlas (Paris)FBXO41
WikiGenes150726
SOURCE (Princeton)FBXO41
Genetics Home Reference (NIH)FBXO41
Genomic and cartography
GoldenPath hg38 (UCSC)FBXO41  -     chr2:73254682-73269630 -  2p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FBXO41  -     2p13.2   [Description]    (hg19-Feb_2009)
EnsemblFBXO41 - 2p13.2 [CytoView hg19]  FBXO41 - 2p13.2 [CytoView hg38]
Mapping of homologs : NCBIFBXO41 [Mapview hg19]  FBXO41 [Mapview hg38]
OMIM609108   
Gene and transcription
Genbank (Entrez)AB075820 AK055121 AK095028 AK127503 BC112202
RefSeq transcript (Entrez)NM_001080410
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FBXO41
Cluster EST : UnigeneHs.23158 [ NCBI ]
CGAP (NCI)Hs.23158
Alternative Splicing GalleryENSG00000163013
Gene ExpressionFBXO41 [ NCBI-GEO ]   FBXO41 [ EBI - ARRAY_EXPRESS ]   FBXO41 [ SEEK ]   FBXO41 [ MEM ]
Gene Expression Viewer (FireBrowse)FBXO41 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)150726
GTEX Portal (Tissue expression)FBXO41
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TF61   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TF61  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TF61
Splice isoforms : SwissVarQ8TF61
PhosPhoSitePlusQ8TF61
Domains : Interpro (EBI)F-box_dom    L_dom-like   
Domain families : Pfam (Sanger)F-box-like (PF12937)   
Domain families : Pfam (NCBI)pfam12937   
Conserved Domain (NCBI)FBXO41
DMDM Disease mutations150726
Blocks (Seattle)FBXO41
SuperfamilyQ8TF61
Human Protein AtlasENSG00000163013
Peptide AtlasQ8TF61
IPIIPI00291868   IPI00980381   
Protein Interaction databases
DIP (DOE-UCLA)Q8TF61
IntAct (EBI)Q8TF61
FunCoupENSG00000163013
BioGRIDFBXO41
STRING (EMBL)FBXO41
ZODIACFBXO41
Ontologies - Pathways
QuickGOQ8TF61
Ontology : AmiGOprotein polyubiquitination  ubiquitin-protein transferase activity  ubiquitin-protein transferase activity  cytosol  
Ontology : EGO-EBIprotein polyubiquitination  ubiquitin-protein transferase activity  ubiquitin-protein transferase activity  cytosol  
NDEx NetworkFBXO41
Atlas of Cancer Signalling NetworkFBXO41
Wikipedia pathwaysFBXO41
Orthology - Evolution
OrthoDB150726
GeneTree (enSembl)ENSG00000163013
Phylogenetic Trees/Animal Genes : TreeFamFBXO41
HOVERGENQ8TF61
HOGENOMQ8TF61
Homologs : HomoloGeneFBXO41
Homology/Alignments : Family Browser (UCSC)FBXO41
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFBXO41 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FBXO41
dbVarFBXO41
ClinVarFBXO41
1000_GenomesFBXO41 
Exome Variant ServerFBXO41
ExAC (Exome Aggregation Consortium)FBXO41 (select the gene name)
Genetic variants : HAPMAP150726
Genomic Variants (DGV)FBXO41 [DGVbeta]
DECIPHERFBXO41 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFBXO41 
Mutations
ICGC Data PortalFBXO41 
TCGA Data PortalFBXO41 
Broad Tumor PortalFBXO41
OASIS PortalFBXO41 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFBXO41  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFBXO41
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FBXO41
DgiDB (Drug Gene Interaction Database)FBXO41
DoCM (Curated mutations)FBXO41 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FBXO41 (select a term)
intoGenFBXO41
Cancer3DFBXO41(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609108   
Orphanet
MedgenFBXO41
Genetic Testing Registry FBXO41
NextProtQ8TF61 [Medical]
TSGene150726
GENETestsFBXO41
Target ValidationFBXO41
Huge Navigator FBXO41 [HugePedia]
snp3D : Map Gene to Disease150726
BioCentury BCIQFBXO41
ClinGenFBXO41
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150726
Chemical/Pharm GKB GenePA134946052
Clinical trialFBXO41
Miscellaneous
canSAR (ICR)FBXO41 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFBXO41
EVEXFBXO41
GoPubMedFBXO41
iHOPFBXO41
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:49:03 CEST 2017

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