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FBXO43 (F-box protein 43)

Identity

Alias_symbol (synonym)Fbx43
Other aliasEMI2
ERP1
FBX43
HGNC (Hugo) FBXO43
LocusID (NCBI) 286151
Atlas_Id 47237
Location 8q22.2  [Link to chromosome band 8q22]
Location_base_pair Starts at 101145588 and ends at 101158099 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FBXO43   28521
Cards
Entrez_Gene (NCBI)FBXO43  286151  F-box protein 43
AliasesEMI2; ERP1; FBX43
GeneCards (Weizmann)FBXO43
Ensembl hg19 (Hinxton)ENSG00000156509 [Gene_View]  chr8:101145588-101158099 [Contig_View]  FBXO43 [Vega]
Ensembl hg38 (Hinxton)ENSG00000156509 [Gene_View]  chr8:101145588-101158099 [Contig_View]  FBXO43 [Vega]
ICGC DataPortalENSG00000156509
TCGA cBioPortalFBXO43
AceView (NCBI)FBXO43
Genatlas (Paris)FBXO43
WikiGenes286151
SOURCE (Princeton)FBXO43
Genetics Home Reference (NIH)FBXO43
Genomic and cartography
GoldenPath hg19 (UCSC)FBXO43  -     chr8:101145588-101158099 -  8q22.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FBXO43  -     8q22.2   [Description]    (hg38-Dec_2013)
EnsemblFBXO43 - 8q22.2 [CytoView hg19]  FBXO43 - 8q22.2 [CytoView hg38]
Mapping of homologs : NCBIFBXO43 [Mapview hg19]  FBXO43 [Mapview hg38]
OMIM609110   
Gene and transcription
Genbank (Entrez)AI198884 AK310518 BC028709 BC090892 BC156850
RefSeq transcript (Entrez)NM_001029860 NM_001077528
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008046 NW_004929340
Consensus coding sequences : CCDS (NCBI)FBXO43
Cluster EST : UnigeneHs.339577 [ NCBI ]
CGAP (NCI)Hs.339577
Alternative Splicing GalleryENSG00000156509
Gene ExpressionFBXO43 [ NCBI-GEO ]   FBXO43 [ EBI - ARRAY_EXPRESS ]   FBXO43 [ SEEK ]   FBXO43 [ MEM ]
Gene Expression Viewer (FireBrowse)FBXO43 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)286151
GTEX Portal (Tissue expression)FBXO43
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ4G163   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ4G163  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ4G163
Splice isoforms : SwissVarQ4G163
PhosPhoSitePlusQ4G163
Domains : Interpro (EBI)IBR_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)IBR (SM00647)  
Conserved Domain (NCBI)FBXO43
DMDM Disease mutations286151
Blocks (Seattle)FBXO43
SuperfamilyQ4G163
Human Protein AtlasENSG00000156509
Peptide AtlasQ4G163
HPRD18777
IPIIPI00175439   IPI00974261   
Protein Interaction databases
DIP (DOE-UCLA)Q4G163
IntAct (EBI)Q4G163
FunCoupENSG00000156509
BioGRIDFBXO43
STRING (EMBL)FBXO43
ZODIACFBXO43
Ontologies - Pathways
QuickGOQ4G163
Ontology : AmiGOnucleus  regulation of mitotic nuclear division  protein ubiquitination  negative regulation of meiotic nuclear division  metal ion binding  meiotic cell cycle  negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  
Ontology : EGO-EBInucleus  regulation of mitotic nuclear division  protein ubiquitination  negative regulation of meiotic nuclear division  metal ion binding  meiotic cell cycle  negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  
Pathways : KEGGOocyte meiosis   
NDEx NetworkFBXO43
Atlas of Cancer Signalling NetworkFBXO43
Wikipedia pathwaysFBXO43
Orthology - Evolution
OrthoDB286151
GeneTree (enSembl)ENSG00000156509
Phylogenetic Trees/Animal Genes : TreeFamFBXO43
HOVERGENQ4G163
HOGENOMQ4G163
Homologs : HomoloGeneFBXO43
Homology/Alignments : Family Browser (UCSC)FBXO43
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFBXO43 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FBXO43
dbVarFBXO43
ClinVarFBXO43
1000_GenomesFBXO43 
Exome Variant ServerFBXO43
ExAC (Exome Aggregation Consortium)FBXO43 (select the gene name)
Genetic variants : HAPMAP286151
Genomic Variants (DGV)FBXO43 [DGVbeta]
DECIPHER (Syndromes)8:101145588-101158099  ENSG00000156509
CONAN: Copy Number AnalysisFBXO43 
Mutations
ICGC Data PortalFBXO43 
TCGA Data PortalFBXO43 
Broad Tumor PortalFBXO43
OASIS PortalFBXO43 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFBXO43  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFBXO43
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FBXO43
DgiDB (Drug Gene Interaction Database)FBXO43
DoCM (Curated mutations)FBXO43 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FBXO43 (select a term)
intoGenFBXO43
Cancer3DFBXO43(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609110   
Orphanet
MedgenFBXO43
Genetic Testing Registry FBXO43
NextProtQ4G163 [Medical]
TSGene286151
GENETestsFBXO43
Huge Navigator FBXO43 [HugePedia]
snp3D : Map Gene to Disease286151
BioCentury BCIQFBXO43
ClinGenFBXO43
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD286151
Chemical/Pharm GKB GenePA134913061
Clinical trialFBXO43
Miscellaneous
canSAR (ICR)FBXO43 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFBXO43
EVEXFBXO43
GoPubMedFBXO43
iHOPFBXO43
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:01:00 CEST 2017

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