Atlas of Genetics and Cytogenetics in Oncology and Haematology


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FBXW4P1 (F-box and WD repeat domain containing 4 pseudogene 1)

Identity

Alias (NCBI)FBW3
FBXW3
SHFM3P1
HGNC (Hugo) FBXW4P1
HGNC Alias symbFBW3
HGNC Previous nameFBXW3
 SHFM3P1
HGNC Previous nameF-box and WD-40 domain protein 3
 split hand/foot malformation (ectrodactyly) type 3 pseudogene 1
LocusID (NCBI) 26226
Atlas_Id 63342
Location 22q11.23  [Link to chromosome band 22q11]
Location_base_pair Starts at 23262767 and ends at 23264999 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FBXW4P1   13609
Cards
Entrez_Gene (NCBI)FBXW4P1  26226  F-box and WD repeat domain containing 4 pseudogene 1
AliasesFBW3; FBXW3; SHFM3P1
GeneCards (Weizmann)FBXW4P1
Ensembl hg19 (Hinxton)ENSG00000230701 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230701 [Gene_View]  ENSG00000230701 [Sequence]  chr22:23262767-23264999 [Contig_View]  FBXW4P1 [Vega]
ICGC DataPortalENSG00000230701
TCGA cBioPortalFBXW4P1
AceView (NCBI)FBXW4P1
Genatlas (Paris)FBXW4P1
WikiGenes26226
SOURCE (Princeton)FBXW4P1
Genetics Home Reference (NIH)FBXW4P1
Genomic and cartography
GoldenPath hg38 (UCSC)FBXW4P1  -     chr22:23262767-23264999 +  22q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FBXW4P1  -     22q11.23   [Description]    (hg19-Feb_2009)
GoldenPathFBXW4P1 - 22q11.23 [CytoView hg19]  FBXW4P1 - 22q11.23 [CytoView hg38]
ImmunoBaseENSG00000230701
genome Data Viewer NCBIFBXW4P1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF174606 AI432341 AK024483 AK314175 BP385887
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FBXW4P1
Alternative Splicing GalleryENSG00000230701
Gene ExpressionFBXW4P1 [ NCBI-GEO ]   FBXW4P1 [ EBI - ARRAY_EXPRESS ]   FBXW4P1 [ SEEK ]   FBXW4P1 [ MEM ]
Gene Expression Viewer (FireBrowse)FBXW4P1 [ Firebrowse - Broad ]
GenevisibleExpression of FBXW4P1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26226
GTEX Portal (Tissue expression)FBXW4P1
Human Protein AtlasENSG00000230701-FBXW4P1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FBXW4P1
DMDM Disease mutations26226
Blocks (Seattle)FBXW4P1
Human Protein Atlas [tissue]ENSG00000230701-FBXW4P1 [tissue]
IPIIPI00437807   
Protein Interaction databases
FunCoupENSG00000230701
BioGRIDFBXW4P1
STRING (EMBL)FBXW4P1
ZODIACFBXW4P1
Ontologies - Pathways
Huge Navigator FBXW4P1 [HugePedia]
snp3D : Map Gene to Disease26226
BioCentury BCIQFBXW4P1
ClinGenFBXW4P1
Clinical trials, drugs, therapy
Protein Interactions : CTD26226
Pharm GKB GenePA28053
Clinical trialFBXW4P1
Miscellaneous
canSAR (ICR)FBXW4P1 (select the gene name)
HarmonizomeFBXW4P1
DataMed IndexFBXW4P1
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFBXW4P1
EVEXFBXW4P1
GoPubMedFBXW4P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 15:55:54 CEST 2020

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