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FCAMR (Fc fragment of IgA and IgM receptor)

Identity

Alias_namesFc receptor, IgA, IgM, high affinity
Alias_symbol (synonym)FKSG87
FCA/MR
CD351
Other alias
HGNC (Hugo) FCAMR
LocusID (NCBI) 83953
Atlas_Id 63345
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 206957967 and ends at 206970625 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PDZRN3 (3p13) / FCAMR (1q32.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FCAMR   24692
Cards
Entrez_Gene (NCBI)FCAMR  83953  Fc fragment of IgA and IgM receptor
AliasesCD351; FCA/MR; FKSG87
GeneCards (Weizmann)FCAMR
Ensembl hg19 (Hinxton)ENSG00000162897 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000162897 [Gene_View]  chr1:206957967-206970625 [Contig_View]  FCAMR [Vega]
ICGC DataPortalENSG00000162897
TCGA cBioPortalFCAMR
AceView (NCBI)FCAMR
Genatlas (Paris)FCAMR
WikiGenes83953
SOURCE (Princeton)FCAMR
Genetics Home Reference (NIH)FCAMR
Genomic and cartography
GoldenPath hg38 (UCSC)FCAMR  -     chr1:206957967-206970625 -  1q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FCAMR  -     1q32.1   [Description]    (hg19-Feb_2009)
EnsemblFCAMR - 1q32.1 [CytoView hg19]  FCAMR - 1q32.1 [CytoView hg38]
Mapping of homologs : NCBIFCAMR [Mapview hg19]  FCAMR [Mapview hg38]
OMIM605484   
Gene and transcription
Genbank (Entrez)AF354295 AI269147 AI478563 AK298394 AY063125
RefSeq transcript (Entrez)NM_001122979 NM_001122980 NM_001170631 NM_032029
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FCAMR
Cluster EST : UnigeneHs.145519 [ NCBI ]
CGAP (NCI)Hs.145519
Alternative Splicing GalleryENSG00000162897
Gene ExpressionFCAMR [ NCBI-GEO ]   FCAMR [ EBI - ARRAY_EXPRESS ]   FCAMR [ SEEK ]   FCAMR [ MEM ]
Gene Expression Viewer (FireBrowse)FCAMR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)83953
GTEX Portal (Tissue expression)FCAMR
Human Protein AtlasENSG00000162897-FCAMR [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WWV6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WWV6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WWV6
Splice isoforms : SwissVarQ8WWV6
PhosPhoSitePlusQ8WWV6
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Ig_V-set   
Domain families : Pfam (Sanger)V-set (PF07686)   
Domain families : Pfam (NCBI)pfam07686   
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)FCAMR
DMDM Disease mutations83953
Blocks (Seattle)FCAMR
SuperfamilyQ8WWV6
Human Protein Atlas [tissue]ENSG00000162897-FCAMR [tissue]
Peptide AtlasQ8WWV6
HPRD12020
IPIIPI00890801   IPI00141559   IPI00179290   IPI00954849   IPI00945506   
Protein Interaction databases
DIP (DOE-UCLA)Q8WWV6
IntAct (EBI)Q8WWV6
FunCoupENSG00000162897
BioGRIDFCAMR
STRING (EMBL)FCAMR
ZODIACFCAMR
Ontologies - Pathways
QuickGOQ8WWV6
Ontology : AmiGOadaptive immune response  plasma membrane  integral component of membrane  leukocyte migration  
Ontology : EGO-EBIadaptive immune response  plasma membrane  integral component of membrane  leukocyte migration  
NDEx NetworkFCAMR
Atlas of Cancer Signalling NetworkFCAMR
Wikipedia pathwaysFCAMR
Orthology - Evolution
OrthoDB83953
GeneTree (enSembl)ENSG00000162897
Phylogenetic Trees/Animal Genes : TreeFamFCAMR
HOVERGENQ8WWV6
HOGENOMQ8WWV6
Homologs : HomoloGeneFCAMR
Homology/Alignments : Family Browser (UCSC)FCAMR
Gene fusions - Rearrangements
Fusion: Tumor Portal FCAMR
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFCAMR [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FCAMR
dbVarFCAMR
ClinVarFCAMR
1000_GenomesFCAMR 
Exome Variant ServerFCAMR
ExAC (Exome Aggregation Consortium)ENSG00000162897
GNOMAD BrowserENSG00000162897
Genetic variants : HAPMAP83953
Genomic Variants (DGV)FCAMR [DGVbeta]
DECIPHERFCAMR [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFCAMR 
Mutations
ICGC Data PortalFCAMR 
TCGA Data PortalFCAMR 
Broad Tumor PortalFCAMR
OASIS PortalFCAMR [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFCAMR  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFCAMR
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FCAMR
DgiDB (Drug Gene Interaction Database)FCAMR
DoCM (Curated mutations)FCAMR (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FCAMR (select a term)
intoGenFCAMR
Cancer3DFCAMR(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605484   
Orphanet
MedgenFCAMR
Genetic Testing Registry FCAMR
NextProtQ8WWV6 [Medical]
TSGene83953
GENETestsFCAMR
Target ValidationFCAMR
Huge Navigator FCAMR [HugePedia]
snp3D : Map Gene to Disease83953
BioCentury BCIQFCAMR
ClinGenFCAMR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83953
Chemical/Pharm GKB GenePA142671773
Clinical trialFCAMR
Miscellaneous
canSAR (ICR)FCAMR (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFCAMR
EVEXFCAMR
GoPubMedFCAMR
iHOPFCAMR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:47:38 CET 2017

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