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FCGR1B (Fc fragment of IgG receptor Ib)

Identity

Alias_namesFc fragment of IgG, high affinity Ib, receptor for (CD64)
Fc fragment of IgG, high affinity Ib, receptor (CD64)
Alias_symbol (synonym)CD64b
Other aliasIGFRB
HGNC (Hugo) FCGR1B
LocusID (NCBI) 2210
Atlas_Id 63347
Location 1p11.2  [Link to chromosome band 1p11]
Location_base_pair Starts at 121087345 and ends at 121097161 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FCGR1B   3614
Cards
Entrez_Gene (NCBI)FCGR1B  2210  Fc fragment of IgG receptor Ib
AliasesCD64b; IGFRB
GeneCards (Weizmann)FCGR1B
Ensembl hg19 (Hinxton)ENSG00000198019 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198019 [Gene_View]  chr1:121087345-121097161 [Contig_View]  FCGR1B [Vega]
ICGC DataPortalENSG00000198019
TCGA cBioPortalFCGR1B
AceView (NCBI)FCGR1B
Genatlas (Paris)FCGR1B
WikiGenes2210
SOURCE (Princeton)FCGR1B
Genetics Home Reference (NIH)FCGR1B
Genomic and cartography
GoldenPath hg38 (UCSC)FCGR1B  -     chr1:121087345-121097161 +  1p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FCGR1B  -     1p11.2   [Description]    (hg19-Feb_2009)
EnsemblFCGR1B - 1p11.2 [CytoView hg19]  FCGR1B - 1p11.2 [CytoView hg38]
Mapping of homologs : NCBIFCGR1B [Mapview hg19]  FCGR1B [Mapview hg38]
OMIM601502   
Gene and transcription
Genbank (Entrez)AK307244 AK308886 AK311502 AW134502 BC110416
RefSeq transcript (Entrez)NM_001004340 NM_001017986 NM_001244910
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FCGR1B
Cluster EST : UnigeneHs.534956 [ NCBI ]
CGAP (NCI)Hs.534956
Alternative Splicing GalleryENSG00000198019
Gene ExpressionFCGR1B [ NCBI-GEO ]   FCGR1B [ EBI - ARRAY_EXPRESS ]   FCGR1B [ SEEK ]   FCGR1B [ MEM ]
Gene Expression Viewer (FireBrowse)FCGR1B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2210
GTEX Portal (Tissue expression)FCGR1B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ92637   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ92637  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ92637
Splice isoforms : SwissVarQ92637
PhosPhoSitePlusQ92637
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Ig_sub2   
Domain families : Pfam (Sanger)Ig_2 (PF13895)   
Domain families : Pfam (NCBI)pfam13895   
Domain families : Smart (EMBL)IG (SM00409)  IGc2 (SM00408)  
Conserved Domain (NCBI)FCGR1B
DMDM Disease mutations2210
Blocks (Seattle)FCGR1B
SuperfamilyQ92637
Human Protein AtlasENSG00000198019
Peptide AtlasQ92637
HPRD14225
IPIIPI00383647   IPI00890744   IPI00294221   IPI00644622   
Protein Interaction databases
DIP (DOE-UCLA)Q92637
IntAct (EBI)Q92637
FunCoupENSG00000198019
BioGRIDFCGR1B
STRING (EMBL)FCGR1B
ZODIACFCGR1B
Ontologies - Pathways
QuickGOQ92637
Ontology : AmiGOadaptive immune response  antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent  plasma membrane  plasma membrane  receptor-mediated endocytosis  immune response  integral component of membrane  immunoglobulin receptor activity  IgG binding  clathrin-coated endocytic vesicle membrane  early endosome membrane  Fc receptor signaling pathway  interferon-gamma-mediated signaling pathway  
Ontology : EGO-EBIadaptive immune response  antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent  plasma membrane  plasma membrane  receptor-mediated endocytosis  immune response  integral component of membrane  immunoglobulin receptor activity  IgG binding  clathrin-coated endocytic vesicle membrane  early endosome membrane  Fc receptor signaling pathway  interferon-gamma-mediated signaling pathway  
NDEx NetworkFCGR1B
Atlas of Cancer Signalling NetworkFCGR1B
Wikipedia pathwaysFCGR1B
Orthology - Evolution
OrthoDB2210
GeneTree (enSembl)ENSG00000198019
Phylogenetic Trees/Animal Genes : TreeFamFCGR1B
HOVERGENQ92637
HOGENOMQ92637
Homologs : HomoloGeneFCGR1B
Homology/Alignments : Family Browser (UCSC)FCGR1B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFCGR1B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FCGR1B
dbVarFCGR1B
ClinVarFCGR1B
1000_GenomesFCGR1B 
Exome Variant ServerFCGR1B
ExAC (Exome Aggregation Consortium)FCGR1B (select the gene name)
Genetic variants : HAPMAP2210
Genomic Variants (DGV)FCGR1B [DGVbeta]
DECIPHERFCGR1B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFCGR1B 
Mutations
ICGC Data PortalFCGR1B 
TCGA Data PortalFCGR1B 
Broad Tumor PortalFCGR1B
OASIS PortalFCGR1B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFCGR1B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFCGR1B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FCGR1B
DgiDB (Drug Gene Interaction Database)FCGR1B
DoCM (Curated mutations)FCGR1B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FCGR1B (select a term)
intoGenFCGR1B
Cancer3DFCGR1B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601502   
Orphanet
MedgenFCGR1B
Genetic Testing Registry FCGR1B
NextProtQ92637 [Medical]
TSGene2210
GENETestsFCGR1B
Target ValidationFCGR1B
Huge Navigator FCGR1B [HugePedia]
snp3D : Map Gene to Disease2210
BioCentury BCIQFCGR1B
ClinGenFCGR1B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2210
Chemical/Pharm GKB GenePA28061
Clinical trialFCGR1B
Miscellaneous
canSAR (ICR)FCGR1B (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFCGR1B
EVEXFCGR1B
GoPubMedFCGR1B
iHOPFCGR1B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:49:06 CEST 2017

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