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FCGR2C (Fc fragment of IgG receptor IIc (gene/pseudogene))

Identity

Alias_namesFc fragment of IgG, low affinity IIc, receptor for (CD32)
Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)
Alias_symbol (synonym)hFcRII-C
CD32C
Other aliasCD32
CDW32
FCG2
FCRIIC
IGFR2
HGNC (Hugo) FCGR2C
LocusID (NCBI) 9103
Atlas_Id 52219
Location 1q23.3  [Link to chromosome band 1q23]
Location_base_pair Starts at 161551129 and ends at 161571010 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FCGR2C   15626
Cards
Entrez_Gene (NCBI)FCGR2C  9103  Fc fragment of IgG receptor IIc (gene/pseudogene)
AliasesCD32; CD32C; CDW32; FCG2; 
FCRIIC; IGFR2
GeneCards (Weizmann)FCGR2C
Ensembl hg19 (Hinxton) [Gene_View]  chr1:161551129-161571010 [Contig_View]  FCGR2C [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:161551129-161571010 [Contig_View]  FCGR2C [Vega]
TCGA cBioPortalFCGR2C
AceView (NCBI)FCGR2C
Genatlas (Paris)FCGR2C
WikiGenes9103
SOURCE (Princeton)FCGR2C
Genetics Home Reference (NIH)FCGR2C
Genomic and cartography
GoldenPath hg19 (UCSC)FCGR2C  -     chr1:161551129-161571010 +  1q23.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FCGR2C  -     1q23.3   [Description]    (hg38-Dec_2013)
EnsemblFCGR2C - 1q23.3 [CytoView hg19]  FCGR2C - 1q23.3 [CytoView hg38]
Mapping of homologs : NCBIFCGR2C [Mapview hg19]  FCGR2C [Mapview hg38]
OMIM188030   612169   
Gene and transcription
Genbank (Entrez)AA416937 AK307162 AK308168 BC137397 BC137423
RefSeq transcript (Entrez)NM_001005410 NM_001005411 NM_001005412 NM_201563
RefSeq genomic (Entrez)NC_000001 NC_018912 NG_011982 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)FCGR2C
Cluster EST : UnigeneHs.656750 [ NCBI ]
CGAP (NCI)Hs.656750
Gene ExpressionFCGR2C [ NCBI-GEO ]   FCGR2C [ EBI - ARRAY_EXPRESS ]   FCGR2C [ SEEK ]   FCGR2C [ MEM ]
Gene Expression Viewer (FireBrowse)FCGR2C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9103
GTEX Portal (Tissue expression)FCGR2C
Protein : pattern, domain, 3D structure
UniProt/SwissProtP31995   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP31995  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP31995
Splice isoforms : SwissVarP31995
PhosPhoSitePlusP31995
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub   
Domain families : Pfam (Sanger)Ig_2 (PF13895)   
Domain families : Pfam (NCBI)pfam13895   
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)FCGR2C
DMDM Disease mutations9103
Blocks (Seattle)FCGR2C
PDB (SRS)3WJL   
PDB (PDBSum)3WJL   
PDB (IMB)3WJL   
PDB (RSDB)3WJL   
Structural Biology KnowledgeBase3WJL   
SCOP (Structural Classification of Proteins)3WJL   
CATH (Classification of proteins structures)3WJL   
SuperfamilyP31995
Peptide AtlasP31995
HPRD13318
IPIIPI00013971   IPI00215903   IPI00215904   
Protein Interaction databases
DIP (DOE-UCLA)P31995
IntAct (EBI)P31995
BioGRIDFCGR2C
STRING (EMBL)FCGR2C
ZODIACFCGR2C
Ontologies - Pathways
QuickGOP31995
Ontology : AmiGOtransmembrane signaling receptor activity  protein binding  cytoplasm  plasma membrane  immune response  signal transduction  integral component of membrane  IgG binding  
Ontology : EGO-EBItransmembrane signaling receptor activity  protein binding  cytoplasm  plasma membrane  immune response  signal transduction  integral component of membrane  IgG binding  
Pathways : KEGGPhagosome    Osteoclast differentiation    Leishmaniasis    Staphylococcus aureus infection    Tuberculosis   
NDEx NetworkFCGR2C
Atlas of Cancer Signalling NetworkFCGR2C
Wikipedia pathwaysFCGR2C
Orthology - Evolution
OrthoDB9103
Phylogenetic Trees/Animal Genes : TreeFamFCGR2C
HOVERGENP31995
HOGENOMP31995
Homologs : HomoloGeneFCGR2C
Homology/Alignments : Family Browser (UCSC)FCGR2C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFCGR2C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FCGR2C
dbVarFCGR2C
ClinVarFCGR2C
1000_GenomesFCGR2C 
Exome Variant ServerFCGR2C
ExAC (Exome Aggregation Consortium)FCGR2C (select the gene name)
Genetic variants : HAPMAP9103
Genomic Variants (DGV)FCGR2C [DGVbeta]
DECIPHER (Syndromes)1:161551129-161571010  
CONAN: Copy Number AnalysisFCGR2C 
Mutations
ICGC Data PortalFCGR2C 
TCGA Data PortalFCGR2C 
Broad Tumor PortalFCGR2C
OASIS PortalFCGR2C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFCGR2C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFCGR2C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FCGR2C
DgiDB (Drug Gene Interaction Database)FCGR2C
DoCM (Curated mutations)FCGR2C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FCGR2C (select a term)
intoGenFCGR2C
Cancer3DFCGR2C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM188030    612169   
Orphanet
MedgenFCGR2C
Genetic Testing Registry FCGR2C
NextProtP31995 [Medical]
TSGene9103
GENETestsFCGR2C
Huge Navigator FCGR2C [HugePedia]
snp3D : Map Gene to Disease9103
BioCentury BCIQFCGR2C
ClinGenFCGR2C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9103
Chemical/Pharm GKB GenePA142671774
Clinical trialFCGR2C
Miscellaneous
canSAR (ICR)FCGR2C (select the gene name)
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFCGR2C
EVEXFCGR2C
GoPubMedFCGR2C
iHOPFCGR2C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:05:54 CET 2017

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