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FCMR (Fc fragment of IgM receptor)

Identity

Alias (NCBI)FAIM3
TOSO
HGNC (Hugo) FCMR
HGNC Alias symbTOSO
HGNC Previous nameFAIM3
HGNC Previous nameFas apoptotic inhibitory molecule 3
LocusID (NCBI) 9214
Atlas_Id 42664
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 206903318 and ends at 206921941 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FCMR (1q32.1) / FCMR (1q32.1)FCMR (1q32.1) / PSMF1 (20p13)FCMR (1q32.1) / SEPT9 (17q25.2)
FCMR (1q32.1) / TMEM87A (15q15.1)MYO1D (17q11.2) / FCMR (1q32.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)FCMR   14315
Cards
Entrez_Gene (NCBI)FCMR    Fc fragment of IgM receptor
AliasesFAIM3; TOSO
GeneCards (Weizmann)FCMR
Ensembl hg19 (Hinxton)ENSG00000162894 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000162894 [Gene_View]  ENSG00000162894 [Sequence]  chr1:206903318-206921941 [Contig_View]  FCMR [Vega]
ICGC DataPortalENSG00000162894
TCGA cBioPortalFCMR
AceView (NCBI)FCMR
Genatlas (Paris)FCMR
SOURCE (Princeton)FCMR
Genetics Home Reference (NIH)FCMR
Genomic and cartography
GoldenPath hg38 (UCSC)FCMR  -     chr1:206903318-206921941 -  1q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FCMR  -     1q32.1   [Description]    (hg19-Feb_2009)
GoldenPathFCMR - 1q32.1 [CytoView hg19]  FCMR - 1q32.1 [CytoView hg38]
ImmunoBaseENSG00000162894
Genome Data Viewer NCBIFCMR [Mapview hg19]  
OMIM606015   
Gene and transcription
Genbank (Entrez)AA769146 AF057557 AI524407 AK292007 AK297053
RefSeq transcript (Entrez)NM_001142472 NM_001142473 NM_001193338 NM_005449
Consensus coding sequences : CCDS (NCBI)FCMR
Gene ExpressionFCMR [ NCBI-GEO ]   FCMR [ EBI - ARRAY_EXPRESS ]   FCMR [ SEEK ]   FCMR [ MEM ]
Gene Expression Viewer (FireBrowse)FCMR [ Firebrowse - Broad ]
GenevisibleExpression of FCMR in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9214
GTEX Portal (Tissue expression)FCMR
Human Protein AtlasENSG00000162894-FCMR [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60667   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60667  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60667
PhosPhoSitePlusO60667
Domains : Interpro (EBI)Ig-like_dom_sf    Ig-like_fold    Ig_sub    Ig_V-set   
Domain families : Pfam (Sanger)V-set (PF07686)   
Domain families : Pfam (NCBI)pfam07686   
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)FCMR
SuperfamilyO60667
AlphaFold pdb e-kbO60667   
Human Protein Atlas [tissue]ENSG00000162894-FCMR [tissue]
HPRD09349
Protein Interaction databases
DIP (DOE-UCLA)O60667
IntAct (EBI)O60667
BioGRIDFCMR
STRING (EMBL)FCMR
ZODIACFCMR
Ontologies - Pathways
QuickGOO60667
Ontology : AmiGOimmune system process  transmembrane signaling receptor activity  extracellular region  plasma membrane  cellular defense response  integral component of membrane  negative regulation of apoptotic process  
Ontology : EGO-EBIimmune system process  transmembrane signaling receptor activity  extracellular region  plasma membrane  cellular defense response  integral component of membrane  negative regulation of apoptotic process  
NDEx NetworkFCMR
Atlas of Cancer Signalling NetworkFCMR
Wikipedia pathwaysFCMR
Orthology - Evolution
OrthoDB9214
GeneTree (enSembl)ENSG00000162894
Phylogenetic Trees/Animal Genes : TreeFamFCMR
Homologs : HomoloGeneFCMR
Homology/Alignments : Family Browser (UCSC)FCMR
Gene fusions - Rearrangements
Fusion : MitelmanMYO1D/FCMR [17q11.2/1q32.1]  
Fusion : QuiverFCMR
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFCMR [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FCMR
dbVarFCMR
ClinVarFCMR
MonarchFCMR
1000_GenomesFCMR 
Exome Variant ServerFCMR
GNOMAD BrowserENSG00000162894
Varsome BrowserFCMR
ACMGFCMR variants
VarityO60667
Genomic Variants (DGV)FCMR [DGVbeta]
DECIPHERFCMR [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFCMR 
Mutations
ICGC Data PortalFCMR 
TCGA Data PortalFCMR 
Broad Tumor PortalFCMR
OASIS PortalFCMR [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFCMR  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DFCMR
Mutations and Diseases : HGMDFCMR
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaFCMR
DgiDB (Drug Gene Interaction Database)FCMR
DoCM (Curated mutations)FCMR
CIViC (Clinical Interpretations of Variants in Cancer)FCMR
Cancer3DFCMR
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606015   
Orphanet
DisGeNETFCMR
MedgenFCMR
Genetic Testing Registry FCMR
NextProtO60667 [Medical]
GENETestsFCMR
Target ValidationFCMR
Huge Navigator FCMR [HugePedia]
ClinGenFCMR
Clinical trials, drugs, therapy
MyCancerGenomeFCMR
Protein Interactions : CTDFCMR
Pharm GKB GenePA142671899
PharosO60667
Clinical trialFCMR
Miscellaneous
canSAR (ICR)FCMR
HarmonizomeFCMR
DataMed IndexFCMR
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFCMR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:09:15 CEST 2021

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