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FCRL2 (Fc receptor like 2)

Identity

Alias_namesSPAP1
SH2 domain-containing phosphatase anchor protein 1
Fc receptor-like 2
Alias_symbol (synonym)FCRH2
IRTA4
CD307b
Other aliasIFGP4
SPAP1A
SPAP1B
SPAP1C
HGNC (Hugo) FCRL2
LocusID (NCBI) 79368
Atlas_Id 50298
Location 1q23.1  [Link to chromosome band 1q23]
Location_base_pair Starts at 157745733 and ends at 157777132 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FCRL2   14875
Cards
Entrez_Gene (NCBI)FCRL2  79368  Fc receptor like 2
AliasesCD307b; FCRH2; IFGP4; IRTA4; 
SPAP1; SPAP1A; SPAP1B; SPAP1C
GeneCards (Weizmann)FCRL2
Ensembl hg19 (Hinxton)ENSG00000132704 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132704 [Gene_View]  chr1:157745733-157777132 [Contig_View]  FCRL2 [Vega]
ICGC DataPortalENSG00000132704
TCGA cBioPortalFCRL2
AceView (NCBI)FCRL2
Genatlas (Paris)FCRL2
WikiGenes79368
SOURCE (Princeton)FCRL2
Genetics Home Reference (NIH)FCRL2
Genomic and cartography
GoldenPath hg38 (UCSC)FCRL2  -     chr1:157745733-157777132 -  1q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FCRL2  -     1q23.1   [Description]    (hg19-Feb_2009)
EnsemblFCRL2 - 1q23.1 [CytoView hg19]  FCRL2 - 1q23.1 [CytoView hg38]
Mapping of homologs : NCBIFCRL2 [Mapview hg19]  FCRL2 [Mapview hg38]
OMIM606509   
Gene and transcription
Genbank (Entrez)AF319438 AF319439 AF319440 AF390037 AF459633
RefSeq transcript (Entrez)NM_001159488 NM_030764 NM_138738
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FCRL2
Cluster EST : UnigeneHs.437393 [ NCBI ]
CGAP (NCI)Hs.437393
Alternative Splicing GalleryENSG00000132704
Gene ExpressionFCRL2 [ NCBI-GEO ]   FCRL2 [ EBI - ARRAY_EXPRESS ]   FCRL2 [ SEEK ]   FCRL2 [ MEM ]
Gene Expression Viewer (FireBrowse)FCRL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79368
GTEX Portal (Tissue expression)FCRL2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96LA5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96LA5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96LA5
Splice isoforms : SwissVarQ96LA5
PhosPhoSitePlusQ96LA5
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Ig_sub2   
Domain families : Pfam (Sanger)Ig_2 (PF13895)   
Domain families : Pfam (NCBI)pfam13895   
Domain families : Smart (EMBL)IG (SM00409)  IGc2 (SM00408)  
Conserved Domain (NCBI)FCRL2
DMDM Disease mutations79368
Blocks (Seattle)FCRL2
SuperfamilyQ96LA5
Human Protein AtlasENSG00000132704
Peptide AtlasQ96LA5
HPRD07351
IPIIPI00107694   IPI00097529   IPI00382413   IPI00013114   IPI00431992   IPI01010898   
Protein Interaction databases
DIP (DOE-UCLA)Q96LA5
IntAct (EBI)Q96LA5
FunCoupENSG00000132704
BioGRIDFCRL2
STRING (EMBL)FCRL2
ZODIACFCRL2
Ontologies - Pathways
QuickGOQ96LA5
Ontology : AmiGOSH3/SH2 adaptor activity  protein binding  plasma membrane  cell-cell signaling  positive regulation of signal transduction  integral component of membrane  
Ontology : EGO-EBISH3/SH2 adaptor activity  protein binding  plasma membrane  cell-cell signaling  positive regulation of signal transduction  integral component of membrane  
NDEx NetworkFCRL2
Atlas of Cancer Signalling NetworkFCRL2
Wikipedia pathwaysFCRL2
Orthology - Evolution
OrthoDB79368
GeneTree (enSembl)ENSG00000132704
Phylogenetic Trees/Animal Genes : TreeFamFCRL2
HOVERGENQ96LA5
HOGENOMQ96LA5
Homologs : HomoloGeneFCRL2
Homology/Alignments : Family Browser (UCSC)FCRL2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFCRL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FCRL2
dbVarFCRL2
ClinVarFCRL2
1000_GenomesFCRL2 
Exome Variant ServerFCRL2
ExAC (Exome Aggregation Consortium)FCRL2 (select the gene name)
Genetic variants : HAPMAP79368
Genomic Variants (DGV)FCRL2 [DGVbeta]
DECIPHERFCRL2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFCRL2 
Mutations
ICGC Data PortalFCRL2 
TCGA Data PortalFCRL2 
Broad Tumor PortalFCRL2
OASIS PortalFCRL2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFCRL2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFCRL2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FCRL2
DgiDB (Drug Gene Interaction Database)FCRL2
DoCM (Curated mutations)FCRL2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FCRL2 (select a term)
intoGenFCRL2
Cancer3DFCRL2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606509   
Orphanet
MedgenFCRL2
Genetic Testing Registry FCRL2
NextProtQ96LA5 [Medical]
TSGene79368
GENETestsFCRL2
Target ValidationFCRL2
Huge Navigator FCRL2 [HugePedia]
snp3D : Map Gene to Disease79368
BioCentury BCIQFCRL2
ClinGenFCRL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79368
Chemical/Pharm GKB GenePA37913
Clinical trialFCRL2
Miscellaneous
canSAR (ICR)FCRL2 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFCRL2
EVEXFCRL2
GoPubMedFCRL2
iHOPFCRL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:53:20 CEST 2017

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