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FCRL6 (Fc receptor like 6)

Identity

Alias_namesFc receptor-like 6
Alias_symbol (synonym)IFGP6
FLJ16056
FcRH6
Other alias
HGNC (Hugo) FCRL6
LocusID (NCBI) 343413
Atlas_Id 63349
Location 1q23.2  [Link to chromosome band 1q23]
Location_base_pair Starts at 159802383 and ends at 159816257 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FCRL6   31910
Cards
Entrez_Gene (NCBI)FCRL6  343413  Fc receptor like 6
AliasesFcRH6
GeneCards (Weizmann)FCRL6
Ensembl hg19 (Hinxton)ENSG00000181036 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181036 [Gene_View]  chr1:159802383-159816257 [Contig_View]  FCRL6 [Vega]
ICGC DataPortalENSG00000181036
TCGA cBioPortalFCRL6
AceView (NCBI)FCRL6
Genatlas (Paris)FCRL6
WikiGenes343413
SOURCE (Princeton)FCRL6
Genetics Home Reference (NIH)FCRL6
Genomic and cartography
GoldenPath hg38 (UCSC)FCRL6  -     chr1:159802383-159816257 +  1q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FCRL6  -     1q23.2   [Description]    (hg19-Feb_2009)
EnsemblFCRL6 - 1q23.2 [CytoView hg19]  FCRL6 - 1q23.2 [CytoView hg38]
Mapping of homologs : NCBIFCRL6 [Mapview hg19]  FCRL6 [Mapview hg38]
OMIM613562   
Gene and transcription
Genbank (Entrez)AI631310 AK131201 AK301270 AY212514 AY513661
RefSeq transcript (Entrez)NM_001004310 NM_001284217
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FCRL6
Cluster EST : UnigeneHs.196955 [ NCBI ]
CGAP (NCI)Hs.196955
Alternative Splicing GalleryENSG00000181036
Gene ExpressionFCRL6 [ NCBI-GEO ]   FCRL6 [ EBI - ARRAY_EXPRESS ]   FCRL6 [ SEEK ]   FCRL6 [ MEM ]
Gene Expression Viewer (FireBrowse)FCRL6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)343413
GTEX Portal (Tissue expression)FCRL6
Human Protein AtlasENSG00000181036-FCRL6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6DN72   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6DN72  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6DN72
Splice isoforms : SwissVarQ6DN72
PhosPhoSitePlusQ6DN72
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Ig_sub2   
Domain families : Pfam (Sanger)Ig_2 (PF13895)   
Domain families : Pfam (NCBI)pfam13895   
Domain families : Smart (EMBL)IG (SM00409)  IGc2 (SM00408)  
Conserved Domain (NCBI)FCRL6
DMDM Disease mutations343413
Blocks (Seattle)FCRL6
SuperfamilyQ6DN72
Human Protein Atlas [tissue]ENSG00000181036-FCRL6 [tissue]
Peptide AtlasQ6DN72
HPRD14177
IPIIPI00418616   IPI00455270   IPI00795167   IPI00457113   IPI01009321   
Protein Interaction databases
DIP (DOE-UCLA)Q6DN72
IntAct (EBI)Q6DN72
FunCoupENSG00000181036
BioGRIDFCRL6
STRING (EMBL)FCRL6
ZODIACFCRL6
Ontologies - Pathways
QuickGOQ6DN72
Ontology : AmiGOexternal side of plasma membrane  integral component of membrane  
Ontology : EGO-EBIexternal side of plasma membrane  integral component of membrane  
NDEx NetworkFCRL6
Atlas of Cancer Signalling NetworkFCRL6
Wikipedia pathwaysFCRL6
Orthology - Evolution
OrthoDB343413
GeneTree (enSembl)ENSG00000181036
Phylogenetic Trees/Animal Genes : TreeFamFCRL6
HOVERGENQ6DN72
HOGENOMQ6DN72
Homologs : HomoloGeneFCRL6
Homology/Alignments : Family Browser (UCSC)FCRL6
Gene fusions - Rearrangements
Fusion: Tumor Portal FCRL6
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFCRL6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FCRL6
dbVarFCRL6
ClinVarFCRL6
1000_GenomesFCRL6 
Exome Variant ServerFCRL6
ExAC (Exome Aggregation Consortium)ENSG00000181036
GNOMAD BrowserENSG00000181036
Genetic variants : HAPMAP343413
Genomic Variants (DGV)FCRL6 [DGVbeta]
DECIPHERFCRL6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFCRL6 
Mutations
ICGC Data PortalFCRL6 
TCGA Data PortalFCRL6 
Broad Tumor PortalFCRL6
OASIS PortalFCRL6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFCRL6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFCRL6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FCRL6
DgiDB (Drug Gene Interaction Database)FCRL6
DoCM (Curated mutations)FCRL6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FCRL6 (select a term)
intoGenFCRL6
Cancer3DFCRL6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613562   
Orphanet
MedgenFCRL6
Genetic Testing Registry FCRL6
NextProtQ6DN72 [Medical]
TSGene343413
GENETestsFCRL6
Target ValidationFCRL6
Huge Navigator FCRL6 [HugePedia]
snp3D : Map Gene to Disease343413
BioCentury BCIQFCRL6
ClinGenFCRL6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD343413
Chemical/Pharm GKB GenePA142671770
Clinical trialFCRL6
Miscellaneous
canSAR (ICR)FCRL6 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFCRL6
EVEXFCRL6
GoPubMedFCRL6
iHOPFCRL6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:47:39 CET 2017

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