Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

FCRLA (Fc receptor like A)

Identity

Alias_namesFCRLM1
Fc receptor-like and mucin-like 1
Fc receptor-like A
Alias_symbol (synonym)MGC4595
FCRLc2
FCRLb
FCRLc1
FCRLd
FCRLe
FCRL
FCRLa
FREB
FCRLX
Other aliasFCRL1
FCRX
HGNC (Hugo) FCRLA
LocusID (NCBI) 84824
Atlas_Id 40640
Location 1q23.3  [Link to chromosome band 1q23]
Location_base_pair Starts at 161706972 and ends at 161714352 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FCRLA (1q23.3) / FCRLA (1q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FCRLA   18504
Cards
Entrez_Gene (NCBI)FCRLA  84824  Fc receptor like A
AliasesFCRL; FCRL1; FCRLM1; FCRLX; 
FCRLb; FCRLc1; FCRLc2; FCRLd; FCRLe; FCRX; FREB
GeneCards (Weizmann)FCRLA
Ensembl hg19 (Hinxton)ENSG00000132185 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132185 [Gene_View]  chr1:161706972-161714352 [Contig_View]  FCRLA [Vega]
ICGC DataPortalENSG00000132185
TCGA cBioPortalFCRLA
AceView (NCBI)FCRLA
Genatlas (Paris)FCRLA
WikiGenes84824
SOURCE (Princeton)FCRLA
Genetics Home Reference (NIH)FCRLA
Genomic and cartography
GoldenPath hg38 (UCSC)FCRLA  -     chr1:161706972-161714352 +  1q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FCRLA  -     1q23.3   [Description]    (hg19-Feb_2009)
EnsemblFCRLA - 1q23.3 [CytoView hg19]  FCRLA - 1q23.3 [CytoView hg38]
Mapping of homologs : NCBIFCRLA [Mapview hg19]  FCRLA [Mapview hg38]
OMIM606891   
Gene and transcription
Genbank (Entrez)AF329489 AF329491 AF329493 AF329494 AF329495
RefSeq transcript (Entrez)NM_001184866 NM_001184867 NM_001184870 NM_001184871 NM_001184872 NM_001184873 NM_032738
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FCRLA
Cluster EST : UnigeneHs.266331 [ NCBI ]
CGAP (NCI)Hs.266331
Alternative Splicing GalleryENSG00000132185
Gene ExpressionFCRLA [ NCBI-GEO ]   FCRLA [ EBI - ARRAY_EXPRESS ]   FCRLA [ SEEK ]   FCRLA [ MEM ]
Gene Expression Viewer (FireBrowse)FCRLA [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84824
GTEX Portal (Tissue expression)FCRLA
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7L513   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7L513  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7L513
Splice isoforms : SwissVarQ7L513
PhosPhoSitePlusQ7L513
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub   
Domain families : Pfam (Sanger)Ig_2 (PF13895)   
Domain families : Pfam (NCBI)pfam13895   
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)FCRLA
DMDM Disease mutations84824
Blocks (Seattle)FCRLA
PDB (SRS)4HWN   
PDB (PDBSum)4HWN   
PDB (IMB)4HWN   
PDB (RSDB)4HWN   
Structural Biology KnowledgeBase4HWN   
SCOP (Structural Classification of Proteins)4HWN   
CATH (Classification of proteins structures)4HWN   
SuperfamilyQ7L513
Human Protein AtlasENSG00000132185
Peptide AtlasQ7L513
IPIIPI00646535   IPI00292096   IPI00745500   IPI00641296   IPI00334123   IPI00640728   IPI00044501   IPI00747979   IPI00289766   
Protein Interaction databases
DIP (DOE-UCLA)Q7L513
IntAct (EBI)Q7L513
FunCoupENSG00000132185
BioGRIDFCRLA
STRING (EMBL)FCRLA
ZODIACFCRLA
Ontologies - Pathways
QuickGOQ7L513
Ontology : AmiGOcytoplasm  cell differentiation  
Ontology : EGO-EBIcytoplasm  cell differentiation  
NDEx NetworkFCRLA
Atlas of Cancer Signalling NetworkFCRLA
Wikipedia pathwaysFCRLA
Orthology - Evolution
OrthoDB84824
GeneTree (enSembl)ENSG00000132185
Phylogenetic Trees/Animal Genes : TreeFamFCRLA
HOVERGENQ7L513
HOGENOMQ7L513
Homologs : HomoloGeneFCRLA
Homology/Alignments : Family Browser (UCSC)FCRLA
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFCRLA [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FCRLA
dbVarFCRLA
ClinVarFCRLA
1000_GenomesFCRLA 
Exome Variant ServerFCRLA
ExAC (Exome Aggregation Consortium)FCRLA (select the gene name)
Genetic variants : HAPMAP84824
Genomic Variants (DGV)FCRLA [DGVbeta]
DECIPHERFCRLA [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFCRLA 
Mutations
ICGC Data PortalFCRLA 
TCGA Data PortalFCRLA 
Broad Tumor PortalFCRLA
OASIS PortalFCRLA [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFCRLA  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFCRLA
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FCRLA
DgiDB (Drug Gene Interaction Database)FCRLA
DoCM (Curated mutations)FCRLA (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FCRLA (select a term)
intoGenFCRLA
Cancer3DFCRLA(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606891   
Orphanet
MedgenFCRLA
Genetic Testing Registry FCRLA
NextProtQ7L513 [Medical]
TSGene84824
GENETestsFCRLA
Target ValidationFCRLA
Huge Navigator FCRLA [HugePedia]
snp3D : Map Gene to Disease84824
BioCentury BCIQFCRLA
ClinGenFCRLA
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84824
Chemical/Pharm GKB GenePA162388180
Clinical trialFCRLA
Miscellaneous
canSAR (ICR)FCRLA (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFCRLA
EVEXFCRLA
GoPubMedFCRLA
iHOPFCRLA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:33:46 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.