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FDPSP2 (farnesyl diphosphate synthase pseudogene 2)

Identity

Alias_namesFPSL2
FDPSL2
FDPSL2A
farnesyl diphosphate synthase-like 2 (farnesyl pyrophosphate synthetase-like 2)
farnesyl diphosphate synthase-like 2A (farnesyl pyrophosphate synthetase-like 2A)
Alias_symbol (synonym)TCAG_1641456
Other alias
HGNC (Hugo) FDPSP2
LocusID (NCBI) 619190
Atlas_Id 63351
Location 7q11.23  [Link to chromosome band 7q11]
Location_base_pair Starts at 76470020 and ends at 76475000 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FDPSP2   3633
Cards
Entrez_Gene (NCBI)FDPSP2  619190  farnesyl diphosphate synthase pseudogene 2
AliasesFDPSL2; FDPSL2A; FPSL2
GeneCards (Weizmann)FDPSP2
Ensembl hg19 (Hinxton)ENSG00000233980 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233980 [Gene_View]  chr7:76470020-76475000 [Contig_View]  FDPSP2 [Vega]
ICGC DataPortalENSG00000233980
TCGA cBioPortalFDPSP2
AceView (NCBI)FDPSP2
Genatlas (Paris)FDPSP2
WikiGenes619190
SOURCE (Princeton)FDPSP2
Genetics Home Reference (NIH)FDPSP2
Genomic and cartography
GoldenPath hg38 (UCSC)FDPSP2  -     chr7:76470020-76475000 -  7q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FDPSP2  -     7q11.23   [Description]    (hg19-Feb_2009)
EnsemblFDPSP2 - 7q11.23 [CytoView hg19]  FDPSP2 - 7q11.23 [CytoView hg38]
Mapping of homologs : NCBIFDPSP2 [Mapview hg19]  FDPSP2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW817185 BC050292
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FDPSP2
Cluster EST : UnigeneHs.609978 [ NCBI ]
CGAP (NCI)Hs.609978
Alternative Splicing GalleryENSG00000233980
Gene ExpressionFDPSP2 [ NCBI-GEO ]   FDPSP2 [ EBI - ARRAY_EXPRESS ]   FDPSP2 [ SEEK ]   FDPSP2 [ MEM ]
Gene Expression Viewer (FireBrowse)FDPSP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)619190
GTEX Portal (Tissue expression)FDPSP2
Human Protein AtlasENSG00000233980-FDPSP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FDPSP2
DMDM Disease mutations619190
Blocks (Seattle)FDPSP2
Human Protein Atlas [tissue]ENSG00000233980-FDPSP2 [tissue]
Protein Interaction databases
FunCoupENSG00000233980
BioGRIDFDPSP2
STRING (EMBL)FDPSP2
ZODIACFDPSP2
Ontologies - Pathways
Huge Navigator FDPSP2 [HugePedia]
snp3D : Map Gene to Disease619190
BioCentury BCIQFDPSP2
ClinGenFDPSP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD619190
Clinical trialFDPSP2
Miscellaneous
canSAR (ICR)FDPSP2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFDPSP2
EVEXFDPSP2
GoPubMedFDPSP2
iHOPFDPSP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:47:39 CET 2017

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