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FER1L6-AS1 (FER1L6 antisense RNA 1)

Identity

Alias_namesC8orf54
chromosome 8 open reading frame 54
FER1L6 antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)FLJ35721
Other alias
HGNC (Hugo) FER1L6-AS1
LocusID (NCBI) 439941
Atlas_Id 63360
Location 8q24.13  [Link to chromosome band 8q24]
Location_base_pair Starts at 123984138 and ends at 124040782 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FER1L6-AS1   26652
Cards
Entrez_Gene (NCBI)FER1L6-AS1  439941  FER1L6 antisense RNA 1
AliasesC8orf54
GeneCards (Weizmann)FER1L6-AS1
Ensembl hg19 (Hinxton)ENSG00000181171 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181171 [Gene_View]  chr8:123984138-124040782 [Contig_View]  FER1L6-AS1 [Vega]
ICGC DataPortalENSG00000181171
TCGA cBioPortalFER1L6-AS1
AceView (NCBI)FER1L6-AS1
Genatlas (Paris)FER1L6-AS1
WikiGenes439941
SOURCE (Princeton)FER1L6-AS1
Genetics Home Reference (NIH)FER1L6-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)FER1L6-AS1  -     chr8:123984138-124040782 -  8q24.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FER1L6-AS1  -     8q24.13   [Description]    (hg19-Feb_2009)
EnsemblFER1L6-AS1 - 8q24.13 [CytoView hg19]  FER1L6-AS1 - 8q24.13 [CytoView hg38]
Mapping of homologs : NCBIFER1L6-AS1 [Mapview hg19]  FER1L6-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093040 BC137357
RefSeq transcript (Entrez)NM_001038706
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FER1L6-AS1
Cluster EST : UnigeneHs.683919 [ NCBI ]
CGAP (NCI)Hs.683919
Alternative Splicing GalleryENSG00000181171
Gene ExpressionFER1L6-AS1 [ NCBI-GEO ]   FER1L6-AS1 [ EBI - ARRAY_EXPRESS ]   FER1L6-AS1 [ SEEK ]   FER1L6-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)FER1L6-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)439941
GTEX Portal (Tissue expression)FER1L6-AS1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NA97   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NA97  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NA97
Splice isoforms : SwissVarQ8NA97
PhosPhoSitePlusQ8NA97
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FER1L6-AS1
DMDM Disease mutations439941
Blocks (Seattle)FER1L6-AS1
SuperfamilyQ8NA97
Human Protein AtlasENSG00000181171
Peptide AtlasQ8NA97
IPIIPI00167940   
Protein Interaction databases
DIP (DOE-UCLA)Q8NA97
IntAct (EBI)Q8NA97
FunCoupENSG00000181171
BioGRIDFER1L6-AS1
STRING (EMBL)FER1L6-AS1
ZODIACFER1L6-AS1
Ontologies - Pathways
QuickGOQ8NA97
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFER1L6-AS1
Atlas of Cancer Signalling NetworkFER1L6-AS1
Wikipedia pathwaysFER1L6-AS1
Orthology - Evolution
OrthoDB439941
GeneTree (enSembl)ENSG00000181171
Phylogenetic Trees/Animal Genes : TreeFamFER1L6-AS1
HOVERGENQ8NA97
HOGENOMQ8NA97
Homologs : HomoloGeneFER1L6-AS1
Homology/Alignments : Family Browser (UCSC)FER1L6-AS1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFER1L6-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FER1L6-AS1
dbVarFER1L6-AS1
ClinVarFER1L6-AS1
1000_GenomesFER1L6-AS1 
Exome Variant ServerFER1L6-AS1
ExAC (Exome Aggregation Consortium)FER1L6-AS1 (select the gene name)
Genetic variants : HAPMAP439941
Genomic Variants (DGV)FER1L6-AS1 [DGVbeta]
DECIPHERFER1L6-AS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFER1L6-AS1 
Mutations
ICGC Data PortalFER1L6-AS1 
TCGA Data PortalFER1L6-AS1 
Broad Tumor PortalFER1L6-AS1
OASIS PortalFER1L6-AS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFER1L6-AS1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FER1L6-AS1
DgiDB (Drug Gene Interaction Database)FER1L6-AS1
DoCM (Curated mutations)FER1L6-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FER1L6-AS1 (select a term)
intoGenFER1L6-AS1
Cancer3DFER1L6-AS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFER1L6-AS1
Genetic Testing Registry FER1L6-AS1
NextProtQ8NA97 [Medical]
TSGene439941
GENETestsFER1L6-AS1
Target ValidationFER1L6-AS1
Huge Navigator FER1L6-AS1 [HugePedia]
snp3D : Map Gene to Disease439941
BioCentury BCIQFER1L6-AS1
ClinGenFER1L6-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD439941
Chemical/Pharm GKB GenePA142672317
Clinical trialFER1L6-AS1
Miscellaneous
canSAR (ICR)FER1L6-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFER1L6-AS1
EVEXFER1L6-AS1
GoPubMedFER1L6-AS1
iHOPFER1L6-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:08:26 CEST 2017

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