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FER1L6 (fer-1-like family member 6)

Identity

Alias_namesfer-1-like 6 (C. elegans)
Alias_symbol (synonym)C8ORFK23
Other alias
HGNC (Hugo) FER1L6
LocusID (NCBI) 654463
Atlas_Id 63359
Location 8q24.13  [Link to chromosome band 8q24]
Location_base_pair Starts at 124864227 and ends at 125132302 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FER1L6   28065
Cards
Entrez_Gene (NCBI)FER1L6  654463  fer-1-like family member 6
AliasesC8ORFK23
GeneCards (Weizmann)FER1L6
Ensembl hg19 (Hinxton)ENSG00000214814 [Gene_View]  chr8:124864227-125132302 [Contig_View]  FER1L6 [Vega]
Ensembl hg38 (Hinxton)ENSG00000214814 [Gene_View]  chr8:124864227-125132302 [Contig_View]  FER1L6 [Vega]
ICGC DataPortalENSG00000214814
TCGA cBioPortalFER1L6
AceView (NCBI)FER1L6
Genatlas (Paris)FER1L6
WikiGenes654463
SOURCE (Princeton)FER1L6
Genetics Home Reference (NIH)FER1L6
Genomic and cartography
GoldenPath hg19 (UCSC)FER1L6  -     chr8:124864227-125132302 +  8q24.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FER1L6  -     8q24.13   [Description]    (hg38-Dec_2013)
EnsemblFER1L6 - 8q24.13 [CytoView hg19]  FER1L6 - 8q24.13 [CytoView hg38]
Mapping of homologs : NCBIFER1L6 [Mapview hg19]  FER1L6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB196633 DV080599 DW010047
RefSeq transcript (Entrez)NM_001039112
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008046 NW_004929340
Consensus coding sequences : CCDS (NCBI)FER1L6
Cluster EST : UnigeneHs.632058 [ NCBI ]
CGAP (NCI)Hs.632058
Alternative Splicing GalleryENSG00000214814
Gene ExpressionFER1L6 [ NCBI-GEO ]   FER1L6 [ EBI - ARRAY_EXPRESS ]   FER1L6 [ SEEK ]   FER1L6 [ MEM ]
Gene Expression Viewer (FireBrowse)FER1L6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)654463
GTEX Portal (Tissue expression)FER1L6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2WGJ9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2WGJ9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2WGJ9
Splice isoforms : SwissVarQ2WGJ9
PhosPhoSitePlusQ2WGJ9
Domaine pattern : Prosite (Expaxy)C2 (PS50004)   
Domains : Interpro (EBI)C2_dom    FER1L6    FerIin-domain    Ferlin_B-domain   
Domain families : Pfam (Sanger)C2 (PF00168)    FerB (PF08150)    FerI (PF08151)   
Domain families : Pfam (NCBI)pfam00168    pfam08150    pfam08151   
Domain families : Smart (EMBL)C2 (SM00239)  
Conserved Domain (NCBI)FER1L6
DMDM Disease mutations654463
Blocks (Seattle)FER1L6
SuperfamilyQ2WGJ9
Human Protein AtlasENSG00000214814
Peptide AtlasQ2WGJ9
IPIIPI00333405   
Protein Interaction databases
DIP (DOE-UCLA)Q2WGJ9
IntAct (EBI)Q2WGJ9
FunCoupENSG00000214814
BioGRIDFER1L6
STRING (EMBL)FER1L6
ZODIACFER1L6
Ontologies - Pathways
QuickGOQ2WGJ9
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkFER1L6
Atlas of Cancer Signalling NetworkFER1L6
Wikipedia pathwaysFER1L6
Orthology - Evolution
OrthoDB654463
GeneTree (enSembl)ENSG00000214814
Phylogenetic Trees/Animal Genes : TreeFamFER1L6
HOVERGENQ2WGJ9
HOGENOMQ2WGJ9
Homologs : HomoloGeneFER1L6
Homology/Alignments : Family Browser (UCSC)FER1L6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFER1L6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FER1L6
dbVarFER1L6
ClinVarFER1L6
1000_GenomesFER1L6 
Exome Variant ServerFER1L6
ExAC (Exome Aggregation Consortium)FER1L6 (select the gene name)
Genetic variants : HAPMAP654463
Genomic Variants (DGV)FER1L6 [DGVbeta]
DECIPHER (Syndromes)8:124864227-125132302  ENSG00000214814
CONAN: Copy Number AnalysisFER1L6 
Mutations
ICGC Data PortalFER1L6 
TCGA Data PortalFER1L6 
Broad Tumor PortalFER1L6
OASIS PortalFER1L6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFER1L6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFER1L6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FER1L6
DgiDB (Drug Gene Interaction Database)FER1L6
DoCM (Curated mutations)FER1L6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FER1L6 (select a term)
intoGenFER1L6
Cancer3DFER1L6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFER1L6
Genetic Testing Registry FER1L6
NextProtQ2WGJ9 [Medical]
TSGene654463
GENETestsFER1L6
Huge Navigator FER1L6 [HugePedia]
snp3D : Map Gene to Disease654463
BioCentury BCIQFER1L6
ClinGenFER1L6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD654463
Chemical/Pharm GKB GenePA162388227
Clinical trialFER1L6
Miscellaneous
canSAR (ICR)FER1L6 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFER1L6
EVEXFER1L6
GoPubMedFER1L6
iHOPFER1L6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:04:41 CET 2017

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