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FEZ2 (fasciculation and elongation protein zeta 2)

Identity

Other aliasHUM3CL
HGNC (Hugo) FEZ2
LocusID (NCBI) 9637
Atlas_Id 63363
Location 2p22.2  [Link to chromosome band 2p22]
Location_base_pair Starts at 36552261 and ends at 36598189 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CRIM1 (2p22.3) / FEZ2 (2p22.2)FEZ2 (2p22.2) / FEZ2 (2p22.2)FEZ2 (2p22.2) / MBP (18q23)
FEZ2 (2p22.2) / RAB10 (2p23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FEZ2   3660
Cards
Entrez_Gene (NCBI)FEZ2  9637  fasciculation and elongation protein zeta 2
AliasesHUM3CL
GeneCards (Weizmann)FEZ2
Ensembl hg19 (Hinxton)ENSG00000171055 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171055 [Gene_View]  chr2:36552261-36598189 [Contig_View]  FEZ2 [Vega]
ICGC DataPortalENSG00000171055
TCGA cBioPortalFEZ2
AceView (NCBI)FEZ2
Genatlas (Paris)FEZ2
WikiGenes9637
SOURCE (Princeton)FEZ2
Genetics Home Reference (NIH)FEZ2
Genomic and cartography
GoldenPath hg38 (UCSC)FEZ2  -     chr2:36552261-36598189 -  2p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FEZ2  -     2p22.2   [Description]    (hg19-Feb_2009)
EnsemblFEZ2 - 2p22.2 [CytoView hg19]  FEZ2 - 2p22.2 [CytoView hg38]
Mapping of homologs : NCBIFEZ2 [Mapview hg19]  FEZ2 [Mapview hg38]
OMIM604826   
Gene and transcription
Genbank (Entrez)AB076184 AB209719 AF113124 AK025274 AK057492
RefSeq transcript (Entrez)NM_001042548 NM_005102
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FEZ2
Cluster EST : UnigeneHs.258563 [ NCBI ]
CGAP (NCI)Hs.258563
Alternative Splicing GalleryENSG00000171055
Gene ExpressionFEZ2 [ NCBI-GEO ]   FEZ2 [ EBI - ARRAY_EXPRESS ]   FEZ2 [ SEEK ]   FEZ2 [ MEM ]
Gene Expression Viewer (FireBrowse)FEZ2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9637
GTEX Portal (Tissue expression)FEZ2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UHY8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UHY8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UHY8
Splice isoforms : SwissVarQ9UHY8
PhosPhoSitePlusQ9UHY8
Domains : Interpro (EBI)FEZ    FEZ_2   
Domain families : Pfam (Sanger)FEZ (PF07763)   
Domain families : Pfam (NCBI)pfam07763   
Conserved Domain (NCBI)FEZ2
DMDM Disease mutations9637
Blocks (Seattle)FEZ2
SuperfamilyQ9UHY8
Human Protein AtlasENSG00000171055
Peptide AtlasQ9UHY8
HPRD09213
IPIIPI00006098   IPI00554632   IPI00515075   IPI00893363   IPI00893625   IPI00893090   IPI00893218   IPI00892832   IPI00892830   
Protein Interaction databases
DIP (DOE-UCLA)Q9UHY8
IntAct (EBI)Q9UHY8
FunCoupENSG00000171055
BioGRIDFEZ2
STRING (EMBL)FEZ2
ZODIACFEZ2
Ontologies - Pathways
QuickGOQ9UHY8
Ontology : AmiGOprotein binding  cytoplasm  signal transduction  nervous system development  axon guidance  axon  negative regulation of autophagosome assembly  
Ontology : EGO-EBIprotein binding  cytoplasm  signal transduction  nervous system development  axon guidance  axon  negative regulation of autophagosome assembly  
NDEx NetworkFEZ2
Atlas of Cancer Signalling NetworkFEZ2
Wikipedia pathwaysFEZ2
Orthology - Evolution
OrthoDB9637
GeneTree (enSembl)ENSG00000171055
Phylogenetic Trees/Animal Genes : TreeFamFEZ2
HOVERGENQ9UHY8
HOGENOMQ9UHY8
Homologs : HomoloGeneFEZ2
Homology/Alignments : Family Browser (UCSC)FEZ2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFEZ2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FEZ2
dbVarFEZ2
ClinVarFEZ2
1000_GenomesFEZ2 
Exome Variant ServerFEZ2
ExAC (Exome Aggregation Consortium)FEZ2 (select the gene name)
Genetic variants : HAPMAP9637
Genomic Variants (DGV)FEZ2 [DGVbeta]
DECIPHERFEZ2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFEZ2 
Mutations
ICGC Data PortalFEZ2 
TCGA Data PortalFEZ2 
Broad Tumor PortalFEZ2
OASIS PortalFEZ2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFEZ2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFEZ2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FEZ2
DgiDB (Drug Gene Interaction Database)FEZ2
DoCM (Curated mutations)FEZ2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FEZ2 (select a term)
intoGenFEZ2
Cancer3DFEZ2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604826   
Orphanet
MedgenFEZ2
Genetic Testing Registry FEZ2
NextProtQ9UHY8 [Medical]
TSGene9637
GENETestsFEZ2
Target ValidationFEZ2
Huge Navigator FEZ2 [HugePedia]
snp3D : Map Gene to Disease9637
BioCentury BCIQFEZ2
ClinGenFEZ2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9637
Chemical/Pharm GKB GenePA28101
Clinical trialFEZ2
Miscellaneous
canSAR (ICR)FEZ2 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFEZ2
EVEXFEZ2
GoPubMedFEZ2
iHOPFEZ2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:49:09 CEST 2017

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