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FEZF2 (FEZ family zinc finger 2)

Identity

Alias_namesZNF312
zinc finger protein 312
Alias_symbol (synonym)FLJ10142
FKSG36
TOF
FEZL
Zfp312
Other aliasFEZ
ZFP312
HGNC (Hugo) FEZF2
LocusID (NCBI) 55079
Atlas_Id 40547
Location 3p14.2  [Link to chromosome band 3p14]
Location_base_pair Starts at 62369672 and ends at 62373515 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FEZF2   13506
Cards
Entrez_Gene (NCBI)FEZF2  55079  FEZ family zinc finger 2
AliasesFEZ; FEZL; FKSG36; TOF; 
ZFP312; ZNF312
GeneCards (Weizmann)FEZF2
Ensembl hg19 (Hinxton)ENSG00000153266 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000153266 [Gene_View]  chr3:62369672-62373515 [Contig_View]  FEZF2 [Vega]
ICGC DataPortalENSG00000153266
TCGA cBioPortalFEZF2
AceView (NCBI)FEZF2
Genatlas (Paris)FEZF2
WikiGenes55079
SOURCE (Princeton)FEZF2
Genetics Home Reference (NIH)FEZF2
Genomic and cartography
GoldenPath hg38 (UCSC)FEZF2  -     chr3:62369672-62373515 -  3p14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FEZF2  -     3p14.2   [Description]    (hg19-Feb_2009)
EnsemblFEZF2 - 3p14.2 [CytoView hg19]  FEZF2 - 3p14.2 [CytoView hg38]
Mapping of homologs : NCBIFEZF2 [Mapview hg19]  FEZF2 [Mapview hg38]
OMIM607414   
Gene and transcription
Genbank (Entrez)AF064845 AF332890 AK001004 AK290464 BC022464
RefSeq transcript (Entrez)NM_018008
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FEZF2
Cluster EST : UnigeneHs.241523 [ NCBI ]
CGAP (NCI)Hs.241523
Alternative Splicing GalleryENSG00000153266
Gene ExpressionFEZF2 [ NCBI-GEO ]   FEZF2 [ EBI - ARRAY_EXPRESS ]   FEZF2 [ SEEK ]   FEZF2 [ MEM ]
Gene Expression Viewer (FireBrowse)FEZF2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55079
GTEX Portal (Tissue expression)FEZF2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TBJ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TBJ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TBJ5
Splice isoforms : SwissVarQ8TBJ5
PhosPhoSitePlusQ8TBJ5
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam00096    pfam13912   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)FEZF2
DMDM Disease mutations55079
Blocks (Seattle)FEZF2
SuperfamilyQ8TBJ5
Human Protein AtlasENSG00000153266
Peptide AtlasQ8TBJ5
HPRD07596
IPIIPI00154618   IPI00794958   
Protein Interaction databases
DIP (DOE-UCLA)Q8TBJ5
IntAct (EBI)Q8TBJ5
FunCoupENSG00000153266
BioGRIDFEZF2
STRING (EMBL)FEZF2
ZODIACFEZF2
Ontologies - Pathways
QuickGOQ8TBJ5
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  RNA polymerase II core promoter proximal region sequence-specific DNA binding  transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding  transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding  chromatin binding  nucleus  transcription from RNA polymerase II promoter  axon guidance  axonal fasciculation  locomotory behavior  negative regulation of cell proliferation  dendrite development  dentate gyrus development  forebrain anterior/posterior pattern specification  cerebral cortex GABAergic interneuron migration  commitment of neuronal cell to specific neuron type in forebrain  negative regulation of neuron differentiation  positive regulation of neuron differentiation  positive regulation of transcription from RNA polymerase II promoter  metal ion binding  neuron fate determination  regulation of axon guidance  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  RNA polymerase II core promoter proximal region sequence-specific DNA binding  transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding  transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding  chromatin binding  nucleus  transcription from RNA polymerase II promoter  axon guidance  axonal fasciculation  locomotory behavior  negative regulation of cell proliferation  dendrite development  dentate gyrus development  forebrain anterior/posterior pattern specification  cerebral cortex GABAergic interneuron migration  commitment of neuronal cell to specific neuron type in forebrain  negative regulation of neuron differentiation  positive regulation of neuron differentiation  positive regulation of transcription from RNA polymerase II promoter  metal ion binding  neuron fate determination  regulation of axon guidance  
NDEx NetworkFEZF2
Atlas of Cancer Signalling NetworkFEZF2
Wikipedia pathwaysFEZF2
Orthology - Evolution
OrthoDB55079
GeneTree (enSembl)ENSG00000153266
Phylogenetic Trees/Animal Genes : TreeFamFEZF2
HOVERGENQ8TBJ5
HOGENOMQ8TBJ5
Homologs : HomoloGeneFEZF2
Homology/Alignments : Family Browser (UCSC)FEZF2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFEZF2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FEZF2
dbVarFEZF2
ClinVarFEZF2
1000_GenomesFEZF2 
Exome Variant ServerFEZF2
ExAC (Exome Aggregation Consortium)FEZF2 (select the gene name)
Genetic variants : HAPMAP55079
Genomic Variants (DGV)FEZF2 [DGVbeta]
DECIPHERFEZF2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFEZF2 
Mutations
ICGC Data PortalFEZF2 
TCGA Data PortalFEZF2 
Broad Tumor PortalFEZF2
OASIS PortalFEZF2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFEZF2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFEZF2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FEZF2
DgiDB (Drug Gene Interaction Database)FEZF2
DoCM (Curated mutations)FEZF2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FEZF2 (select a term)
intoGenFEZF2
Cancer3DFEZF2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607414   
Orphanet
MedgenFEZF2
Genetic Testing Registry FEZF2
NextProtQ8TBJ5 [Medical]
TSGene55079
GENETestsFEZF2
Target ValidationFEZF2
Huge Navigator FEZF2 [HugePedia]
snp3D : Map Gene to Disease55079
BioCentury BCIQFEZF2
ClinGenFEZF2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55079
Chemical/Pharm GKB GenePA162388420
Clinical trialFEZF2
Miscellaneous
canSAR (ICR)FEZF2 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFEZF2
EVEXFEZF2
GoPubMedFEZF2
iHOPFEZF2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Sep 25 19:08:21 CEST 2017

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