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FFAR3 (free fatty acid receptor 3)

Identity

Alias_namesGPR41
G protein-coupled receptor 41
Alias_symbol (synonym)FFA3R
Other alias
HGNC (Hugo) FFAR3
LocusID (NCBI) 2865
Atlas_Id 63365
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 35849488 and ends at 35851389 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FFAR3   4499
Cards
Entrez_Gene (NCBI)FFAR3  2865  free fatty acid receptor 3
AliasesFFA3R; GPR41
GeneCards (Weizmann)FFAR3
Ensembl hg19 (Hinxton)ENSG00000185897 [Gene_View]  chr19:35849488-35851389 [Contig_View]  FFAR3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000185897 [Gene_View]  chr19:35849488-35851389 [Contig_View]  FFAR3 [Vega]
ICGC DataPortalENSG00000185897
TCGA cBioPortalFFAR3
AceView (NCBI)FFAR3
Genatlas (Paris)FFAR3
WikiGenes2865
SOURCE (Princeton)FFAR3
Genetics Home Reference (NIH)FFAR3
Genomic and cartography
GoldenPath hg19 (UCSC)FFAR3  -     chr19:35849488-35851389 +  19q13.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FFAR3  -     19q13.12   [Description]    (hg38-Dec_2013)
EnsemblFFAR3 - 19q13.12 [CytoView hg19]  FFAR3 - 19q13.12 [CytoView hg38]
Mapping of homologs : NCBIFFAR3 [Mapview hg19]  FFAR3 [Mapview hg38]
OMIM603821   
Gene and transcription
Genbank (Entrez)AK290710 BC035657 BC113695 BC148269 DQ891235
RefSeq transcript (Entrez)NM_005304
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)FFAR3
Cluster EST : UnigeneHs.248055 [ NCBI ]
CGAP (NCI)Hs.248055
Alternative Splicing GalleryENSG00000185897
Gene ExpressionFFAR3 [ NCBI-GEO ]   FFAR3 [ EBI - ARRAY_EXPRESS ]   FFAR3 [ SEEK ]   FFAR3 [ MEM ]
Gene Expression Viewer (FireBrowse)FFAR3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2865
GTEX Portal (Tissue expression)FFAR3
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14843   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14843  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14843
Splice isoforms : SwissVarO14843
PhosPhoSitePlusO14843
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    GPR40-rel_orph   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)FFAR3
DMDM Disease mutations2865
Blocks (Seattle)FFAR3
SuperfamilyO14843
Human Protein AtlasENSG00000185897
Peptide AtlasO14843
HPRD04823
IPIIPI00024208   
Protein Interaction databases
DIP (DOE-UCLA)O14843
IntAct (EBI)O14843
FunCoupENSG00000185897
BioGRIDFFAR3
STRING (EMBL)FFAR3
ZODIACFFAR3
Ontologies - Pathways
QuickGOO14843
Ontology : AmiGOmucosal immune response  positive regulation of cytokine production involved in immune response  positive regulation of acute inflammatory response to non-antigenic stimulus  G-protein coupled receptor activity  plasma membrane  plasma membrane  integral component of plasma membrane  inflammatory response  G-protein coupled receptor signaling pathway  adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway  lipid binding  regulation of norepinephrine secretion  positive regulation of chemokine production  negative regulation of blood pressure  regulation of hormone biosynthetic process  cellular response to fatty acid  regulation of peptide hormone secretion  positive regulation of glucose import in response to insulin stimulus  
Ontology : EGO-EBImucosal immune response  positive regulation of cytokine production involved in immune response  positive regulation of acute inflammatory response to non-antigenic stimulus  G-protein coupled receptor activity  plasma membrane  plasma membrane  integral component of plasma membrane  inflammatory response  G-protein coupled receptor signaling pathway  adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway  lipid binding  regulation of norepinephrine secretion  positive regulation of chemokine production  negative regulation of blood pressure  regulation of hormone biosynthetic process  cellular response to fatty acid  regulation of peptide hormone secretion  positive regulation of glucose import in response to insulin stimulus  
NDEx NetworkFFAR3
Atlas of Cancer Signalling NetworkFFAR3
Wikipedia pathwaysFFAR3
Orthology - Evolution
OrthoDB2865
GeneTree (enSembl)ENSG00000185897
Phylogenetic Trees/Animal Genes : TreeFamFFAR3
HOVERGENO14843
HOGENOMO14843
Homologs : HomoloGeneFFAR3
Homology/Alignments : Family Browser (UCSC)FFAR3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFFAR3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FFAR3
dbVarFFAR3
ClinVarFFAR3
1000_GenomesFFAR3 
Exome Variant ServerFFAR3
ExAC (Exome Aggregation Consortium)FFAR3 (select the gene name)
Genetic variants : HAPMAP2865
Genomic Variants (DGV)FFAR3 [DGVbeta]
DECIPHER (Syndromes)19:35849488-35851389  ENSG00000185897
CONAN: Copy Number AnalysisFFAR3 
Mutations
ICGC Data PortalFFAR3 
TCGA Data PortalFFAR3 
Broad Tumor PortalFFAR3
OASIS PortalFFAR3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFFAR3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFFAR3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FFAR3
DgiDB (Drug Gene Interaction Database)FFAR3
DoCM (Curated mutations)FFAR3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FFAR3 (select a term)
intoGenFFAR3
Cancer3DFFAR3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603821   
Orphanet
MedgenFFAR3
Genetic Testing Registry FFAR3
NextProtO14843 [Medical]
TSGene2865
GENETestsFFAR3
Huge Navigator FFAR3 [HugePedia]
snp3D : Map Gene to Disease2865
BioCentury BCIQFFAR3
ClinGenFFAR3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2865
Chemical/Pharm GKB GenePA28888
Clinical trialFFAR3
Miscellaneous
canSAR (ICR)FFAR3 (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFFAR3
EVEXFFAR3
GoPubMedFFAR3
iHOPFFAR3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:04:43 CET 2017

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