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FGD5-AS1 (FGD5 antisense RNA 1)

Identity

Alias_namesFGD5 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) FGD5-AS1
LocusID (NCBI) 100505641
Atlas_Id 63367
Location 3p25.1  [Link to chromosome band 3p25]
Location_base_pair Starts at 14942779 and ends at 14948441 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FGD5-AS1   40410
Cards
Entrez_Gene (NCBI)FGD5-AS1  100505641  FGD5 antisense RNA 1
Aliases
GeneCards (Weizmann)FGD5-AS1
Ensembl hg19 (Hinxton)ENSG00000225733 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225733 [Gene_View]  chr3:14942779-14948441 [Contig_View]  FGD5-AS1 [Vega]
ICGC DataPortalENSG00000225733
TCGA cBioPortalFGD5-AS1
AceView (NCBI)FGD5-AS1
Genatlas (Paris)FGD5-AS1
WikiGenes100505641
SOURCE (Princeton)FGD5-AS1
Genetics Home Reference (NIH)FGD5-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)FGD5-AS1  -     chr3:14942779-14948441 -  3p25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FGD5-AS1  -     3p25.1   [Description]    (hg19-Feb_2009)
EnsemblFGD5-AS1 - 3p25.1 [CytoView hg19]  FGD5-AS1 - 3p25.1 [CytoView hg38]
Mapping of homologs : NCBIFGD5-AS1 [Mapview hg19]  FGD5-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055924 AK096279 BC008609 BC014104 BC033386
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FGD5-AS1
Cluster EST : UnigeneHs.517821 [ NCBI ]
CGAP (NCI)Hs.517821
Alternative Splicing GalleryENSG00000225733
Gene ExpressionFGD5-AS1 [ NCBI-GEO ]   FGD5-AS1 [ EBI - ARRAY_EXPRESS ]   FGD5-AS1 [ SEEK ]   FGD5-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)FGD5-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505641
GTEX Portal (Tissue expression)FGD5-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FGD5-AS1
DMDM Disease mutations100505641
Blocks (Seattle)FGD5-AS1
Human Protein AtlasENSG00000225733
Protein Interaction databases
FunCoupENSG00000225733
BioGRIDFGD5-AS1
STRING (EMBL)FGD5-AS1
ZODIACFGD5-AS1
Ontologies - Pathways
Huge Navigator FGD5-AS1 [HugePedia]
snp3D : Map Gene to Disease100505641
BioCentury BCIQFGD5-AS1
ClinGenFGD5-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505641
Clinical trialFGD5-AS1
Miscellaneous
canSAR (ICR)FGD5-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFGD5-AS1
EVEXFGD5-AS1
GoPubMedFGD5-AS1
iHOPFGD5-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:08:27 CEST 2017

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